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IDSAVERM_4943 TypeCDS
From5995665 nt length606
To5996270 aa length201
GenerpsE pI11.12
Definitionputative ribosomal protein S5 M.W (Da)20343
NotePF03719: Ribosomal protein S5, C-terminal domain AseI frg.I
SignalP v.4.0Non-secretory protein | plot Categoryribosomal protein

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4719 30S ribosomal protein S53221.0e-114
sgrSGR_2817 30S ribosomal protein S53801.0e-137
samSAM23877_4515 30S ribosomal protein S52885.0e-101
scabSCAB36771 putative ribosomal protein S53802.0e-137
saceSACE_6819 30S ribosomal protein S52642.0e-91
nfarnfa7910 rpsE ribosomal protein S52852.5e-78
mtubgi|15607861 30S ribosomal protein S5 [Mycobacterium tuberculosis H37Rv]2837.4e-78
cglugi|19551777 COG0098:Ribosomal protein S5 [Corynebacterium glutamicum]2697.9e-74
bsubBG10442 rpsE, spcA; 30S ribosomal protein S51851.9e-48
ecoligi|16131182 30S ribosomal protein S5 [Escherichia coli K12]1769.8e-46
paerPA4246 [gene=rpsE] [prot=30S ribosomal protein S5] [comment=PA4246]1653.0e-42

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_S5_C1Ribosomal protein S5, C-terminal domain110-18098.21.3e-28

Ribosomal_S51Ribosomal protein S5, N-terminal domain36-9894.23.3e-27

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_033319646.1 MULTISPECIES: 30S ribosomal protein S5 [Streptomyces] >gb 7053.3e-92
WP_103549189.1 30S ribosomal protein S5 [Streptomyces populi] >gb 7044.2e-92
WP_005481208.1 MULTISPECIES: 30S ribosomal protein S5 [Streptomyces] >gb 7044.2e-92
WP_037694140.1 MULTISPECIES: 30S ribosomal protein S5 [Streptomyces] >gb 7044.7e-92
WP_007384078.1 MULTISPECIES: 30S ribosomal protein S5 [Streptomyces] >lcl 7044.8e-92
WP_127912612.1 MULTISPECIES: 30S ribosomal protein S5 [Streptomyces] >lcl 7035.3e-92
WP_097285860.1 30S ribosomal protein S5 [Streptomyces sp. OK228] >emb 7028.6e-92
WP_055513610.1 MULTISPECIES: 30S ribosomal protein S5 [Streptomyces] >gb 7029.0e-92
WP_037626974.1 30S ribosomal protein S5 [Streptomyces aureus] 7019.8e-92
WP_217237693.1 30S ribosomal protein S5 [Streptomyces sp. AC555_RSS877] 7011.3e-91

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4247 Seems to have no N-terminal signal seq.