| ID | SAVERM_4958
| Type | CDS
|
| From | 6006315
| nt length | 522
|
| To | 6006836
| aa length | 173
|
| Gene | rpsI
| pI | 9.82
|
| Definition | putative ribosomal protein S9
| M.W (Da) | 19024
|
| Note | longer N-terminus compared with other bacteria, PF00380: Ribosomal protein S9/S16
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | ribosomal protein
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4735 30S ribosomal protein S9 | 322 | 2.0e-115
|
| sgr | SGR_2801 putative 30S ribosomal protein S9 | 307 | 2.0e-109
|
| sam | SAM23877_4530 30S ribosomal protein S9 | 326 | 7.0e-117
|
| scab | SCAB36621 putative ribosomal protein S9 | 334 | 5.0e-120
|
| sace | SACE_6780 30S ribosomal protein S9 | 156 | 4.0e-50
|
| nfar | nfa8670 rpsI ribosomal protein S9 | 162 | 1.9e-41
|
| mtub | gi|15610578 30S ribosomal protein S9 [Mycobacterium tuberculosis H37Rv] | 160 | 4.4e-41
|
| cglu | gi|19551816 COG0103:Ribosomal protein S9 [Corynebacterium glutamicum] | 158 | 1.2e-40
|
| bsub | BG19007 rpsI; 30S ribosomal protein S9 | 129 | 1.3e-31
|
| ecoli | gi|16131120 30S ribosomal protein S9 [Escherichia coli K12] | 123 | 5.9e-30
|
| paer | PA4432 [gene=rpsI] [prot=30S ribosomal protein S9] [comment=PA4432] | 126 | 1.2e-30
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribosomal_S9 | 1 | Ribosomal protein S9/S16 | 52-173 | 147.8 | 1.9e-43
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3964 | Seems to have no N-terminal signal seq.
|