| ID | SAVERM_4997
| Type | CDS
|
| From | 6046508
| nt length | 330
|
| To | 6046179
| aa length | 109
|
| Gene | wblB
| pI | 6.5
|
| Definition | putative WhiB-family transcriptional regulator; putative role in cell cycle control
| M.W (Da) | 11977
|
| Note | PF02467: Transcription factor WhiB
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4767 putative WhiB-family transcriptional regulator | 196 | 1.0e-67
|
| sgr | SGR_2760 putative WhiB-family transcriptional regulator | 198 | 3.0e-68
|
| sam | SAM23877_4581 Transcriptional regulator WhiD | 202 | 7.0e-70
|
| scab | SCAB36241 putative WhiB-family transcriptional regulator; putative role in cell cycle control | 202 | 6.0e-70
|
| sace | SACE_5583 putative transcriptional regulator (WhiB family) | 114 | 4.0e-35
|
| nfar | nfa8900 transcriptional regulator | 134 | 1.7e-33
|
| mtub | gi|15610552 TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB3 [Mycobacterium tuberculosis H37Rv] | 130 | 2.0e-32
|
| cglu | gi|19551833 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 118 | 7.5e-29
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Whib | 1 | Transcription factor WhiB | 17-87 | 88.0 | 4.4e-25
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_057584636.1 | MULTISPECIES: WhiB family transcriptional regulator [Strepto...
| 548 | 2.8e-71 |
| WP_030788151.1 | MULTISPECIES: WhiB family transcriptional regulator [Strepto...
| 546 | 5.6e-71 |
| WP_109003076.1 | MULTISPECIES: WhiB family transcriptional regulator [Strepto...
| 542 | 2.3e-70 |
| WP_058923717.1 | WhiB family transcriptional regulator [Streptomyces sp. CdTB...
| 542 | 2.5e-70 |
| WP_053709993.1 | WhiB family transcriptional regulator [Streptomyces sp. NRRL...
| 541 | 3.3e-70 |
| WP_073888679.1 | MULTISPECIES: WhiB family transcriptional regulator [unclass...
| 541 | 3.4e-70 |
| WP_189311964.1 | WhiB family transcriptional regulator [Streptomyces brasilie...
| 540 | 3.9e-70 |
| WP_205382493.1 | WhiB family transcriptional regulator [Streptomyces actuosus...
| 540 | 4.2e-70 |
| WP_093777510.1 | WhiB family transcriptional regulator [Streptomyces sp. yr37...
| 540 | 4.3e-70 |
| WP_009190196.1 | MULTISPECIES: WhiB family transcriptional regulator [unclass...
| 540 | 4.4e-70 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2779 | Seems to have no N-terminal signal seq.
|