| ID | SAVERM_5020
| Type | CDS
|
| From | 6078473
| nt length | 546
|
| To | 6077928
| aa length | 181
|
| Gene |
| pI | 10.59
|
| Definition | hypothetical protein
| M.W (Da) | 20219
|
| Note | PF04138: GtrA-like protein
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3061 putative integral membrane protein | 254 | 4.0e-88
|
| sgr | SGR_4476 conserved hypothetical protein | 234 | 2.0e-80
|
| sam | SAM23877_3113 Integral membrane protein | 249 | 2.0e-86
|
| scab | SCAB54841 hypothetical protein | 282 | 9.0e-99
|
| sace | SACE_6489 hypothetical protein | 70 | 4.0e-16
|
| nfar | nfa9990 hypothetical protein | 67 | 6.9e-13
|
| mtub | gi|15610413 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 74 | 3.4e-15
|
| cglu | gi|19551446 COG2246:Uncharacterized membrane protein [Corynebacterium glutamicum] | 35 | 1.3e-03
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GtrA | 1 | GtrA-like protein | 29-149 | 82.1 | 3.3e-23
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3145 | Seems to have no N-terminal signal seq.
|