| ID | SAVERM_5057
| Type | CDS
|
| From | 6130979
| nt length | 1311
|
| To | 6129669
| aa length | 436
|
| Gene |
| pI | 11.55
|
| Definition | putative secreted protein
| M.W (Da) | 47173
|
| Note | PF01882: Protein of unknown function DUF58
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3019 putative lipoprotein | 719 | 0.0e+00
|
| sgr | SGR_4517 conserved hypothetical protein | 626 | 0.0e+00
|
| sam | SAM23877_3057 Lipoprotein | 704 | 0.0e+00
|
| scab | SCAB55221 putative secreted protein | 728 | 0.0e+00
|
| nfar | nfa910 hypothetical protein | 387 | 1.0e-108
|
| mtub | gi|15610829 POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 450 | 7.5e-128
|
| bsub | BG12212 yeaD; similar to unknown proteins from B. subtilis | 48 | 5.8e-07
|
| paer | PA4323 [gene=PA4323] [prot=hypothetical protein] [comment=PA4323] | 155 | 8.9e-39
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF58 | 1 | Protein of unknown function DUF58 | 192-277 | 69.8 | 1.7e-19
|
| DUF11 | 1 | Domain of unknown function DUF11 | 54-132 | 54.4 | 1.1e-14
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189862209.1 | DUF58 domain-containing protein [Streptomyces poonensis] >db...
| 1543 | 0.0e+00 |
| WP_126392675.1 | DUF58 domain-containing protein [Streptomyces cyaneochromoge...
| 1533 | 0.0e+00 |
| WP_067025889.1 | DUF58 domain-containing protein [Streptomyces dysideae] >gb
| 1532 | 0.0e+00 |
| WP_128428895.1 | DUF58 domain-containing protein [Streptomyces cyaneus]
| 1529 | 0.0e+00 |
| WP_015659992.1 | DUF58 domain-containing protein [Streptomyces davaonensis] >...
| 1529 | 0.0e+00 |
| WP_186286608.1 | DUF58 domain-containing protein [Streptomyces sp. PSKA01] >l...
| 1529 | 0.0e+00 |
| WP_134035162.1 | DUF58 domain-containing protein [Streptomyces bluensis] >dbj...
| 1526 | 0.0e+00 |
| NUP21563.1 | DUF58 domain-containing protein [Streptomyces sp.]
| 1525 | 0.0e+00 |
| WP_031487632.1 | DUF58 domain-containing protein [Streptomyces bicolor]
| 1525 | 0.0e+00 |
| WP_189327055.1 | DUF58 domain-containing protein [Streptomyces flaveus] >dbj
| 1524 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| outside | 0.3000 | Seems to have a cleavable N-term signal seq.
|