| ID | SAVERM_5073
| Type | CDS
|
| From | 6150095
| nt length | 516
|
| To | 6150610
| aa length | 171
|
| Gene |
| pI | 3.92
|
| Definition | hypothetical protein
| M.W (Da) | 17579
|
| Note |
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3001 hypothetical protein | 224 | 1.0e-76
|
| sgr | SGR_4533 conserved hypothetical protein | 145 | 1.0e-45
|
| sam | SAM23877_3041 hypothetical protein | 215 | 5.0e-73
|
| scab | SCAB55391 hypothetical protein | 223 | 4.0e-76
|
| sace | SACE_6438 hypothetical protein | 120 | 9.0e-36
|
| nfar | nfa46010 hypothetical protein | 109 | 1.1e-25
|
| mtub | gi|15610367 hypothetical protein Rv3231c [Mycobacterium tuberculosis H37Rv] | 123 | 7.5e-30
|
| cglu | gi|19551988 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 100 | 3.7e-23
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
no hits.
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0451 | Seems to have no N-terminal signal seq.
|