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IDSAVERM_5125 TypeCDS
From6222701 nt length2511
To6225211 aa length836
Gene pI5.27
Definitionputative ATP-dependent helicase M.W (Da)90603
NotePF00580: UvrD/REP helicase AseI frg.B
SignalP v.4.0Non-secretory protein | plot CategoryDNA modification & repair

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2952 putative helicase protein6820.0e+00
sgrSGR_4580 putative helicase12040.0e+00
samSAM23877_2989 Helicase6960.0e+00
scabSCAB55921 putative ATP-dependent helicase13170.0e+00

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

UvrD-helicase1UvrD/REP helicase N-terminal domain605-65445.56.6e-12

UvrD_C_21UvrD-like helicase C-terminal domain776-81835.27.3e-09

PhoH1PhoH-like protein618-65633.13.5e-08

Viral_helicase11Viral (Superfamily 1) RNA helicase613-81833.14.1e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_237529545.1 AAA family ATPase [Streptomyces sp. SID5469] 35840.0e+00
NEB34113.1 AAA family ATPase [Streptomyces sp. SID14446] 31680.0e+00
WP_081217552.1 AAA family ATPase [Streptomyces sp. M41(2017)] >gb 31620.0e+00
NGO11268.1 UvrD-helicase domain-containing protein [Streptomyces scabichelin... 31590.0e+00
WP_031478276.1 UvrD-helicase domain-containing protein [Streptomyces bicolo... 31450.0e+00
WP_030943506.1 AAA family ATPase [Streptomyces sp. NRRL S-646] 31420.0e+00
WP_190074596.1 UvrD-helicase domain-containing protein [Streptomyces lanatu... 31380.0e+00
WP_095934666.1 AAA family ATPase [Streptomyces sp. Tue6028] >gb 31350.0e+00
WP_185124062.1 AAA family ATPase [Streptomyces sp. TLI_185] >gb 31350.0e+00
NUP21031.1 AAA family ATPase [Streptomyces sp.] >gb 31270.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4160 Seems to have no N-terminal signal seq.