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IDSAVERM_5141 TypeCDS
From6246638 nt length642
To6247279 aa length213
GenesdrB pI7.26
Definitionputative differentiation regulon (IclR-family transcriptional regulator) M.W (Da)22414
NotePF01614: Bacterial transcriptional regulator AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categoryregulation


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2935 putative transcriptional regulator3662.0e-131
sgrSGR_4602 putative IclR-family transcriptional regulator3812.0e-137
samSAM23877_2972 Transcriptional regulator3671.0e-131
scabSCAB56321 putative differentiation regulon (IclR-family transcriptional regulator)3857.0e-139
saceSACE_0137 differentiation regulon (IclR-family transcriptional regulator)1972.0e-64
nfarnfa32430 transcriptional regulator1261.6e-30

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_IclR1IclR helix-turn-helix domain8-5853.91.1e-14

Rrf21Transcriptional regulator5-6025.01.7e-05

HTH_111HTH domain14-5024.02.6e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037888473.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 5345.5e-66
WP_189184748.1 helix-turn-helix domain-containing protein [Streptomyces alb... 5346.1e-66
WP_062703418.1 helix-turn-helix domain-containing protein [Streptomyces reg... 5347.4e-66
WP_235452788.1 helix-turn-helix domain-containing protein [Streptomyces oli... 5339.3e-66
WP_168528359.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 5331.1e-65
WP_093910953.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 5321.1e-65
WP_153290321.1 helix-turn-helix domain-containing protein [Streptomyces fag... 5321.2e-65
WP_030042582.1 helix-turn-helix domain-containing protein [Streptomyces res... 5321.2e-65
WP_081217530.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 5321.3e-65
WP_143638415.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 5311.5e-65

PSORT result

LocalizationCertaintyPSORT said
membrane0.2062 Seems to have no N-terminal signal seq.