| ID | SAVERM_5146
| Type | CDS
|
| From | 6252341
| nt length | 1314
|
| To | 6251028
| aa length | 437
|
| Gene | opuBA2
| pI | 5.36
|
| Definition | putative ABC transporter ATP-binding protein
| M.W (Da) | 47657
|
| Note | osmoprotectant transport system ATP-binding protein, PF00005: ABC transporter
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2931 putative ABC transporter ATP-binding protein | 727 | 0.0e+00
|
| sgr | SGR_4609 putative ABC transporter ATP-binding protein | 679 | 0.0e+00
|
| sam | SAM23877_2968 Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA | 728 | 0.0e+00
|
| sace | SACE_0078 putative ABC transporter ATP-binding protein | 466 | 1.0e-164
|
| nfar | nfa30810 ABC transporter ATP-binding protein | 436 | 2.5e-123
|
| bsub | BG12637 opuCA, yvbE; glycine betaine/carnitine/choline transport system ATP-binding protein | 317 | 1.1e-87
|
| paer | PA3891 [gene=PA3891] [prot=probable ATP-binding component of ABC transporter] [comment=PA3891] | 310 | 1.7e-85
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 1 | ABC transporter | 53-198 | 120.1 | 8.9e-35
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498378.1 | betaine/proline/choline family ABC transporter ATP-binding p...
| 2102 | 0.0e+00 |
| WP_081217524.1 | betaine/proline/choline family ABC transporter ATP-binding p...
| 1966 | 0.0e+00 |
| NEB34088.1 | betaine/proline/choline family ABC transporter ATP-binding protei...
| 1962 | 0.0e+00 |
| OQQ20177.1 | polyamine ABC transporter ATP-binding protein [Streptomyces sp. M...
| 1959 | 0.0e+00 |
|
| 1953 | 0.0e+00 |
| WP_095934644.1 | betaine/proline/choline family ABC transporter ATP-binding p...
| 1953 | 0.0e+00 |
| WP_203661577.1 | betaine/proline/choline family ABC transporter ATP-binding p...
| 1950 | 0.0e+00 |
| WP_188338628.1 | betaine/proline/choline family ABC transporter ATP-binding p...
| 1949 | 0.0e+00 |
| WP_210580231.1 | betaine/proline/choline family ABC transporter ATP-binding p...
| 1946 | 0.0e+00 |
| WP_097225719.1 | betaine/proline/choline family ABC transporter ATP-binding p...
| 1945 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2646 | Seems to have no N-terminal signal seq.
|