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IDSAVERM_5147 TypeCDS
From6252981 nt length648
To6252334 aa length215
GeneopuBB2 pI10.06
Definitionputative ABC transporter permease protein M.W (Da)22414
Noteosmoprotectant transport system permease protein, PF01547: Bacterial extracellular solute-binding protein AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2930 putative permease inner membrane component3728.0e-134
sgrSGR_4610 putative ABC transporter permease protein3582.0e-128
samSAM23877_2967 Permease membrane protein3684.0e-132
saceSACE_0077 ABC quaternary amine transporter, permease component2423.0e-82
nfarnfa30820 transporter permease2476.5e-67
ecoligi|16130068 putative glycine/betaine/choline transport protein, osmoprotection (ABC superfamily, membrane) [Escherichia coli K12]1238.3e-30

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; ecoli, Escherichia coli K-12;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component34-20665.93.5e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202498379.1 ABC transporter permease [Streptomyces sp. SID5469] 8566.4e-115
NNN38050.1 ABC transporter permease [Streptomyces sp. S3(2020)] 8332.9e-111
WP_081217523.1 ABC transporter permease [Streptomyces sp. M41(2017)] >gb 8324.2e-111
WP_217142810.1 ABC transporter permease [Streptomyces sp. AC627_RSS907] 8315.1e-111
WP_224733543.1 ABC transporter permease [Streptomyces sp. PSKA30] >lcl 8281.7e-110
NEB04850.1 ABC transporter permease [Streptomyces sp. SID13726] 8272.2e-110
WP_210874654.1 ABC transporter permease [Streptomyces sp. RG38] >lcl 8246.6e-110
WP_033286026.1 ABC transporter permease [Streptomyces sp. NRRL F-525] 8246.8e-110
WP_030603894.1 ABC transporter permease [Streptomyces fulvoviolaceus] 8221.1e-109
WP_190040127.1 ABC transporter permease [Streptomyces fructofermentans] >db... 8221.4e-109

PSORT result

LocalizationCertaintyPSORT said
membrane0.4821 Seems to have no N-terminal signal seq.