| ID | SAVERM_5157
| Type | CDS
|
| From | 6265454
| nt length | 585
|
| To | 6264870
| aa length | 194
|
| Gene | pncA
| pI | 4.49
|
| Definition | putative nicotinamidase
| M.W (Da) | 20088
|
| Note | PF00857: Isochorismatase family
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of coenzymes & prosthetic groups
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2918 putative nicotinamidase | 367 | 3.0e-132
|
| sgr | SGR_4621 putative nicotinamidase | 304 | 1.0e-107
|
| sam | SAM23877_2955 Nicotinamidase | 367 | 2.0e-132
|
| scab | SCAB56461 putative nicotinamidase | 334 | 2.0e-119
|
| sace | SACE_1199 pyrazinamidase / nicotinamidase | 208 | 7.0e-70
|
| nfar | nfa10840 pncA nicotinamidase | 227 | 4.5e-61
|
| mtub | gi|15609180 PYRAZINAMIDASE/NICOTINAMIDAS PNCA (PZase) [Mycobacterium tuberculosis H37Rv] | 236 | 9.8e-64
|
| cglu | gi|19553686 COG1335:Amidases related to nicotinamidase [Corynebacterium glutamicum] | 172 | 9.5e-45
|
| bsub | BG13965 yueJ; similar to pyrazinamidase/nicotinamidase | 62 | 2.2e-11
|
| ecoli | gi|49176146 nicotinamidase and pyrazinamidase [Escherichia coli K12] | 111 | 2.8e-26
|
| paer | PA4918 [gene=PA4918] [prot=hypothetical protein] [comment=PA4918] | 63 | 9.0e-12
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Isochorismatase | 1 | Isochorismatase family | 4-188 | 109.5 | 1.8e-31
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1086 | Seems to have no N-terminal signal seq.
|