| ID | SAVERM_5179
| Type | CDS
|
| From | 6286541
| nt length | 2247
|
| To | 6284295
| aa length | 748
|
| Gene | pbp9
| pI | 5.61
|
| Definition | putative penicillin-binding protein
| M.W (Da) | 78005
|
| Note | PF00912: Transglycosylase
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | cell wall
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2897 probable penicillin-binding protein | 959 | 0.0e+00
|
| sgr | SGR_4647 putative penicillin-binding protein | 821 | 0.0e+00
|
| sam | SAM23877_2931 Multimodular transpeptidase-transglycosylase | 937 | 0.0e+00
|
| scab | SCAB56801 putative penicillin-binding protein | 999 | 0.0e+00
|
| sace | SACE_7356 membrane carboxypeptidase (penicillin-binding protein) | 250 | 3.0e-71
|
| nfar | nfa55570 penicillin-binding protein | 301 | 1.0e-82
|
| mtub | gi|57116685 PROBABLE BIFUNCTIONAL PENICILLIN-BINDING PROTEIN 1A/1B PONA1 (MUREIN POLYMERASE) (PBP1): PENICILLIN-INSENSITIVE TRANSGLYCOSYLASE (PEPTIDOGLYCAN TGASE) + PENICILLIN-SENSITIVE TRANSPEPTIDASE (DD-TRANSPEPTIDASE) [Mycobacterium tuberculosis H37Rv] | 275 | 6.1e-75
|
| cglu | gi|19554180 COG0744:Membrane carboxypeptidase (penicillin-binding protein) [Corynebacterium glutamicum] | 278 | 5.0e-76
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Transgly | 1 | Transglycosylase | 51-220 | 192.2 | 4.8e-57
|
| Transpeptidase | 1 | Penicillin binding protein transpeptidase domain | 321-579 | 114.1 | 6.7e-33
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| outside | 0.3000 | Seems to have a cleavable N-term signal seq.
|