| ID | SAVERM_5214
| Type | CDS
|
| From | 6320308
| nt length | 780
|
| To | 6321087
| aa length | 259
|
| Gene | nagD
| pI | 4.83
|
| Definition | putative N-acetyl-glucosamine catabolism protein
| M.W (Da) | 28048
|
| Note | PF00702: haloacid dehalogenase-like hydrolase
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | cell wall
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2843 conserved hypothetical protein | 491 | 2.0e-179
|
| sgr | SGR_4699 putative N-acetylglucosamine metabolism protein | 471 | 3.0e-171
|
| sam | SAM23877_2888 Ribonucleotide monophosphatase NagD | 484 | 9.0e-177
|
| scab | SCAB57241 putative N-acetyl-glucosamine catabolism protein | 494 | 2.0e-180
|
| sace | SACE_0574 HAD-superfamily hydrolase, subfamily IIA | 363 | 9.0e-129
|
| nfar | nfa53490 nagD N-acetylglucosamine metabolism protein | 369 | 1.5e-103
|
| cglu | gi|19553453 COG0647:Predicted sugar phosphatases of the HAD superfamily [Corynebacterium glutamicum] | 336 | 7.5e-94
|
| bsub | BG14042 yutF; similar to N-acetyl-glucosamine catabolism protein | 172 | 1.4e-44
|
| ecoli | gi|16128651 N-acetylglucosamine metabolism [Escherichia coli K12] | 217 | 7.1e-58
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Hydrolase_6 | 1 | Haloacid dehalogenase-like hydrolase | 10-109 | 94.7 | 2.7e-27
|
| Hydrolase_like | 1 | HAD-hyrolase-like | 182-255 | 77.3 | 6.6e-22
|
| HAD_2 | 1 | Haloacid dehalogenase-like hydrolase | 170-228 | 31.1 | 2.1e-07
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1675 | Seems to have no N-terminal signal seq.
|