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IDSAVERM_5287 TypeCDS
From6407590 nt length1428
To6406163 aa length475
Gene pI4.18
Definitionputative integrin-like protein M.W (Da)46618
NotePF01839: FG-GAP repeat AseI frg.B
SignalP v.4.0Signal peptide | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_4784 conserved hypothetical protein2285.0e-70
scabSCAB3201 hypothetical protein5510.0e+00

*sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FG-GAP5FG-GAP repeat49-76, 157-193, 277-299, 338-373, 407-441128.75.1e-38

VCBS2Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella119-174, 282-35593.11e-26

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_151482779.1 FG-GAP-like repeat-containing protein [Streptomyces albiceru... 15030.0e+00
GGX53853.1 hypothetical protein GCM10010515_21330 [Streptomyces fructoferme... 14860.0e+00
WP_190852418.1 FG-GAP-like repeat-containing protein [Streptomyces glomeroa... 14680.0e+00
WP_141569678.1 FG-GAP-like repeat-containing protein [Streptomyces ipomoeae... 14640.0e+00
WP_093595918.1 VCBS repeat-containing protein [Streptomyces jietaisiensis] ... 14600.0e+00
WP_006143623.1 FG-GAP-like repeat-containing protein [Streptomyces griseoau... 14600.0e+00
GHE42954.1 hypothetical protein GCM10018782_16570 [Streptomyces griseoauran... 14600.0e+00
WP_167793638.1 MULTISPECIES: VCBS repeat-containing protein [Streptomyces] ... 14580.0e+00
WP_009324191.1 FG-GAP-like repeat-containing protein [Streptomyces ipomoeae... 14560.0e+00
WP_107464396.1 FG-GAP-like repeat-containing protein [Streptomyces sp. MA51... 14400.0e+00

PSORT result

LocalizationCertaintyPSORT said
outside0.3000 Seems to have a cleavable N-term signal seq.