| ID | SAVERM_5317
| Type | CDS
|
| From | 6444437
| nt length | 900
|
| To | 6443538
| aa length | 299
|
| Gene | rbsK
| pI | 4.59
|
| Definition | putative ribokinase
| M.W (Da) | 30080
|
| Note | PF00294: pfkB family carbohydrate kinase
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | specific pathways
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2748 carbohydrate kinase | 451 | 5.0e-162
|
| sgr | SGR_1094 putative ribokinase | 412 | 1.0e-146
|
| sam | SAM23877_2773 ribokinase | 455 | 8.0e-164
|
| scab | SCAB58701 putative ribokinase | 459 | 2.0e-165
|
| sace | SACE_3234 sugar kinase in PfkB family | 239 | 7.0e-79
|
| nfar | nfa13700 ribokinase | 189 | 3.3e-49
|
| mtub | gi|15609573 RIBOKINASE RBSK [Mycobacterium tuberculosis H37Rv] | 149 | 1.7e-37
|
| cglu | gi|19552581 COG0524:Sugar kinases, ribokinase family [Corynebacterium glutamicum] | 224 | 3.0e-60
|
| bsub | BG10877 rbsK; ribokinase [EC:2.7.1.15] | 182 | 2.7e-47
|
| ecoli | gi|16131620 ribokinase [Escherichia coli K12] | 184 | 6.2e-48
|
| paer | PA1950 [gene=rbsK] [prot=ribokinase] [comment=PA1950] | 207 | 7.2e-55
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| PfkB | 1 | pfkB family carbohydrate kinase | 6-292 | 208.2 | 1.5e-61
|
| Phos_pyr_kin | 1 | Phosphomethylpyrimidine kinase | 169-281 | 24.7 | 1.3e-05
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2105 | Seems to have no N-terminal signal seq.
|