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IDSAVERM_5320 TypeCDS
From6449083 nt length1065
To6448019 aa length354
GenerbsR pI5.27
Definitionputative LacI-family transcriptional regulator, ribose operon repressor M.W (Da)38050
Notetranscriptional regulator mediating carbon catabolite repression, PF00532: Periplasmic binding proteins and sugar binding domain of the LacI family AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2745 probable LacI-family transcriptional regulator5580.0e+00
sgrSGR_1097 putative LacI-family transcriptional regulator5550.0e+00
samSAM23877_2770 LacI family transcriptional regulator5840.0e+00
saceSACE_0947 putative LacI-family transcriptional regulator2276.0e-73
cglugi|19552472 COG1609:Transcriptional regulators [Corynebacterium glutamicum]1822.1e-47
bsubBG10376 ccpA, graR, amyR, alsA; transcriptional regulator mediating carbon catabolite repression (Lacl family)2046.4e-54
ecoligi|16131772 regulator for deo operon, udp, cdd, tsx, nupC, and nupG [Escherichia coli K12]2186.3e-58
paerPA1949 [gene=rbsR] [prot=ribose operon repressor RbsR] [comment=PA1949]2094.0e-55

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Peripla_BP_31Periplasmic binding protein-like domain168-327136.49.6e-40

Peripla_BP_11Periplasmic binding proteins and sugar binding domain of LacI family60-321107.01.1e-30

LacI1Bacterial regulatory proteins, lacI family3-4873.76.6e-21

Peripla_BP_41Periplasmic binding protein domain63-31068.65.5e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_057600266.1 LacI family transcriptional regulator [Streptomyces sp. Root... 14610.0e+00
WP_020131736.1 LacI family transcriptional regulator [Streptomyces sp. 303M... 14610.0e+00
WP_171397402.1 LacI family transcriptional regulator [Streptomyces asoensis... 14610.0e+00
OQR65015.1 LacI family transcriptional regulator [Streptomyces sp. B9173] 14600.0e+00
WP_142264416.1 MULTISPECIES: LacI family transcriptional regulator [unclass... 14580.0e+00
WP_095854544.1 LacI family transcriptional regulator [Streptomyces sp. Ag82... 14510.0e+00
WP_099922550.1 MULTISPECIES: LacI family transcriptional regulator [Strepto... 14490.0e+00
WP_230396526.1 LacI family transcriptional regulator [Streptomyces blattell... 14480.0e+00
WP_060901924.1 MULTISPECIES: LacI family transcriptional regulator [unclass... 14470.0e+00
WP_144315484.1 LacI family transcriptional regulator [Streptomyces sp. RLB3... 14470.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.1044 Seems to have no N-terminal signal seq.