| ID | SAVERM_5397
| Type | CDS
|
| From | 6545006
| nt length | 1017
|
| To | 6543990
| aa length | 338
|
| Gene | asd2
| pI | 4.88
|
| Definition | putative aspartate-semialdehyde dehydrogenase
| M.W (Da) | 35357
|
| Note | PF02774: Semialdehyde dehydrogenase, dimerisation domain
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2640 asd aspartate semialdehyde dehydrogenase | 590 | 0.0e+00
|
| sgr | SGR_4887 putative aspartate-semialdehyde dehydrogenase | 585 | 0.0e+00
|
| sam | SAM23877_2690 Aspartate-semialdehyde dehydrogenase | 597 | 0.0e+00
|
| scab | SCAB59621 putative aspartate-semialdehyde dehydrogenase | 628 | 0.0e+00
|
| nfar | nfa3190 aspartate-semialdehyde dehydrogenase | 438 | 2.8e-124
|
| mtub | gi|15610844 aspartate-semialdehyde dehydrogenase [Mycobacterium tuberculosis H37Rv] | 419 | 1.4e-118
|
| cglu | gi|19551503 COG0136:Aspartate-semialdehyde dehydrogenase [Corynebacterium glutamicum] | 368 | 2.5e-103
|
| ecoli | gi|16130254 hypothetical protein b2319 [Escherichia coli K12] | 172 | 3.7e-44
|
| paer | PA3116 [gene=PA3116] [prot=probable aspartate-semialdehyde dehydrogenase] [comment=PA3116] | 152 | 3.2e-38
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Semialdhyde_dhC | 1 | Semialdehyde dehydrogenase, dimerisation domain | 132-319 | 180.4 | 3.4e-53
|
| Semialdhyde_dh | 1 | Semialdehyde dehydrogenase, NAD binding domain | 2-112 | 96.7 | 1.2e-27
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_237529567.1 | aspartate-semialdehyde dehydrogenase [Streptomyces sp. SID54...
| 1672 | 0.0e+00 |
| WP_151481502.1 | aspartate-semialdehyde dehydrogenase [Streptomyces albicerus...
| 1650 | 0.0e+00 |
| MXM61919.1 | aspartate-semialdehyde dehydrogenase [Streptomyces sp. HUCO-GS316...
| 1647 | 0.0e+00 |
| WP_018531486.1 | aspartate-semialdehyde dehydrogenase [Streptomyces sp. HmicA...
| 1637 | 0.0e+00 |
| WP_190035277.1 | aspartate-semialdehyde dehydrogenase [Streptomyces fructofer...
| 1637 | 0.0e+00 |
| WP_150949292.1 | aspartate-semialdehyde dehydrogenase [Streptomyces luteolifu...
| 1637 | 0.0e+00 |
| WP_200417403.1 | aspartate-semialdehyde dehydrogenase [Streptomyces sp. Y2F8-...
| 1632 | 0.0e+00 |
|
| 1631 | 0.0e+00 |
| WP_033327997.1 | aspartate-semialdehyde dehydrogenase [Streptomyces yerevanen...
| 1631 | 0.0e+00 |
| MPY52546.1 | aspartate-semialdehyde dehydrogenase [Streptomyces acidicola]
| 1630 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0642 | Seems to have no N-terminal signal seq.
|