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IDSAVERM_5555 TypeCDS
From6721444 nt length1617
To6719828 aa length538
Geneint14 pI8.9
Definitionputative serine-family recombinase/integrase M.W (Da)59893
NotePF07508: Recombinase AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categoryphage-related functions


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4340 putative integrase1372.0e-35
samSAM23877_3394 hypothetical protein1748.0e-49
scabSCAB53221 putative serine-family recombinase/integrase2246.0e-68
nfarnfa28840 recombinase451.2e-05

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Recombinase1Recombinase182-31076.31.9e-21

Resolvase1Resolvase, N terminal domain5-14963.52.1e-17

Zn_ribbon_recom1Recombinase zinc beta ribbon domain327-38526.66.1e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202498433.1 recombinase family protein [Streptomyces sp. SID5469] 26790.0e+00
WP_217549693.1 recombinase family protein [Streptomyces sp. GbtcB6] 20970.0e+00
WP_078603280.1 recombinase family protein [Streptomyces sp. NRRL S-455] 20850.0e+00
WP_150502744.1 recombinase family protein [Streptomyces chartreusis] >gb 20140.0e+00
RSO03611.1 recombinase family protein [Streptomyces sp. WAC 06783] 20090.0e+00
GGX12636.1 integrase [Streptomyces chartreusis] 20090.0e+00
WP_185836967.1 recombinase family protein [Streptomyces sp. WAC 06783] 20080.0e+00
WP_234440785.1 recombinase family protein [Streptomyces rimosus] 19910.0e+00
WP_143652052.1 MULTISPECIES: recombinase family protein [unclassified Strep... 19770.0e+00
ALV38851.1 integrase [Streptomyces sp. CdTB01] 19710.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.1256 Seems to have no N-terminal signal seq.