| ID | SAVERM_5567
| Type | CDS
|
| From | 6738484
| nt length | 813
|
| To | 6737672
| aa length | 270
|
| Gene |
| pI | 6.26
|
| Definition | hypothetical protein
| M.W (Da) | 29449
|
| Note | PF11296: Protein of unknown function (DUF3097)
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2557 hypothetical protein | 445 | 7.0e-161
|
| sgr | SGR_4991 conserved hypothetical protein | 427 | 1.0e-153
|
| sam | SAM23877_2603 hypothetical protein | 432 | 5.0e-156
|
| scab | SCAB61531 hypothetical protein | 430 | 1.0e-154
|
| sace | SACE_3783 hypothetical protein | 302 | 2.0e-104
|
| nfar | nfa34730 hypothetical protein | 278 | 2.8e-76
|
| mtub | gi|15609170 hypothetical protein Rv2033c [Mycobacterium tuberculosis H37Rv] | 308 | 3.3e-85
|
| cglu | gi|19552748 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 248 | 2.9e-67
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3097 | 1 | Protein of unknown function (DUF3097) | 11-266 | 411.0 | 1.8e-123
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| NUT25305.1 | DUF3097 domain-containing protein [Streptomyces sp.]
| 1016 | 1.9e-137 |
| NUP23420.1 | DUF3097 domain-containing protein [Streptomyces sp.]
| 1016 | 1.9e-137 |
| WP_028804627.1 | DUF3097 domain-containing protein [Streptomyces sp. 142MFCol...
| 1007 | 4.9e-136 |
| WP_095934229.1 | DUF3097 domain-containing protein [Streptomyces sp. Tue6028]...
| 1006 | 6.2e-136 |
| WP_189185130.1 | DUF3097 domain-containing protein [Streptomyces albiflavesce...
| 1006 | 6.6e-136 |
| WP_220294135.1 | DUF3097 family protein [Streptomyces sp. MBT84] >lcl
| 1005 | 7.9e-136 |
| WP_048585634.1 | DUF3097 domain-containing protein [Streptomyces viridochromo...
| 1005 | 1.0e-135 |
| WP_181660125.1 | DUF3097 domain-containing protein [Streptomyces himalayensis...
| 1003 | 1.5e-135 |
| WP_099499226.1 | MULTISPECIES: DUF3097 domain-containing protein [Streptomyce...
| 1004 | 1.6e-135 |
| WP_059131537.1 | DUF3097 domain-containing protein [Streptomyces sp. NRRL F-5...
| 1003 | 1.9e-135 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4403 | Seems to have no N-terminal signal seq.
|