| ID | SAVERM_5585
| Type | CDS
|
| From | 6758128
| nt length | 1308
|
| To | 6759435
| aa length | 435
|
| Gene |
| pI | 4.6
|
| Definition | putative transport protein
| M.W (Da) | 46979
|
| Note | PF00571: CBS domain
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2534 hypothetical protein | 744 | 0.0e+00
|
| sgr | SGR_5004 putative transport protein | 736 | 0.0e+00
|
| sam | SAM23877_2585 conserved membrane protein of unknown function | 745 | 0.0e+00
|
| scab | SCAB61711 putative transport protein | 788 | 0.0e+00
|
| sace | SACE_1485 CBS domain protein | 394 | 1.0e-135
|
| nfar | nfa14340 transporter | 403 | 1.4e-113
|
| mtub | gi|15609503 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 414 | 7.7e-117
|
| cglu | gi|19553484 COG1253:Hemolysins and related proteins containing CBS domains [Corynebacterium glutamicum] | 337 | 8.4e-94
|
| ecoli | gi|16128641 putative integral membrane protein [Escherichia coli K12] | 160 | 1.5e-40
|
| paer | PA3983 [gene=PA3983] [prot=conserved hypothetical protein] [comment=PA3983] | 155 | 5.2e-39
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF21 | 1 | Domain of unknown function DUF21 | 8-185 | 106.9 | 8.6e-31
|
| CBS | 2 | CBS domain | 200-256, 272-322 | 61.1 | 9.4e-17
|
| CorC_HlyC | 1 | Transporter associated domain | 339-421 | 46.4 | 2.8e-12
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4609 | May be a lipoprotein
|