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IDSAVERM_5610 TypeCDS
From6787608 nt length963
To6786646 aa length320
GeneoppB7 pI10.12
Definitionputative peptide ABC transporter permease protein M.W (Da)34421
NoteTat substrate, PF00528: Binding-protein-dependent transport system inner membrane component AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_6425 putative ABC transporter permease protein3342.0e-115
samSAM23877_7061 putative ABC transporter permease protein1644.0e-49
scabSCAB86521 putative peptide ABC transporter permease protein1826.0e-56
saceSACE_1275 ABC-transport protein, membrane component1978.0e-62
cglugi|19553850 COG0601:ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Corynebacterium glutamicum]3143.1e-87
ecoligi|16128799 putative dipeptide transport protein (ABC superfamily, membrane) [Escherichia coli K12]2092.0e-55

*sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component118-316114.54.3e-33

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_234512733.1 ABC transporter permease [Streptomyces glomeratus] >lcl 13500.0e+00
WP_053741452.1 ABC transporter permease [Streptomyces sp. NRRL WC-3618] 13470.0e+00
WP_202498443.1 ABC transporter permease [Streptomyces sp. SID5469] 13450.0e+00
WP_095854760.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 13430.0e+00
WP_168491374.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 13410.0e+00
NEA61143.1 ABC transporter permease [Streptomyces sp. SID12488] >gb 13400.0e+00
QIY95806.1 ABC transporter permease [Streptomyces sp. S1D4-11] 13400.0e+00
WP_060896480.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 13400.0e+00
WP_181651383.1 ABC transporter permease [Streptomyces sp. WAC00263] >lcl 13390.0e+00
WP_099922735.1 ABC transporter permease [Streptomyces sp. GbtcB7] 13370.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.3484 Seems to have a cleavable N-term signal seq.