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IDSAVERM_5621 TypeCDS
From6799555 nt length849
To6800403 aa length282
GeneoppC8 pI10.66
Definitionputative peptide ABC transporter permease protein M.W (Da)28875
NotePF00528: Binding-protein-dependent transport system inner membrane component AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO7679 putative transport system integral membrane protein827.0e-19
scabSCAB5241 putative peptide ABC transporter ATP-binding protein3024.0e-104
saceSACE_0991 dipeptide transport system permease protein1293.0e-36

*coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component98-27350.81.5e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_030353575.1 ABC transporter permease subunit [Streptomyces scopuliridis]... 9031.0e-119
WP_093893495.1 ABC transporter permease subunit [Streptomyces sp. Ncost-T10... 8908.4e-118
WP_189281104.1 ABC transporter permease subunit [Streptomyces atratus] >dbj... 8891.2e-117
WP_108151212.1 ABC transporter permease subunit [Streptomyces lunaelactis] ... 8394.7e-110
WP_125813638.1 ABC transporter permease subunit [Streptomyces sp. WAC07149]... 8249.3e-108
WP_097283317.1 ABC transporter permease [Streptomyces sp. OK228] >emb 8116.7e-106
WP_143600529.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 8108.4e-106
WP_143614485.1 ABC transporter permease [Streptomyces sp. RLB3-6] >gb 8072.4e-105
WP_143607282.1 MULTISPECIES: ABC transporter permease subunit [unclassified... 8047.4e-105
WP_181648138.1 ABC transporter permease [Streptomyces sp. WAC00263] >lcl 8047.4e-105

PSORT result

LocalizationCertaintyPSORT said
membrane0.5585 Seems to have no N-terminal signal seq.