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IDSAVERM_5626 TypeCDS
From6805178 nt length834
To6804345 aa length277
Gene pI4.98
Definitionputative DNA-binding protein M.W (Da)30844
NotePF01381: Helix-turn-helix AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2513 hypothetical protein4342.0e-156
samSAM23877_4764 putative DNA-binding protein2315.0e-76
scabSCAB50501 putative DNA-binding protein2171.0e-70

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain13-6839.93.6e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189185175.1 helix-turn-helix transcriptional regulator [Streptomyces alb... 12533.5e-173
WP_164325235.1 helix-turn-helix transcriptional regulator [Streptomyces aur... 12056.7e-166
WP_157164540.1 helix-turn-helix transcriptional regulator [Streptomyces typ... 12004.4e-165
WP_030573736.1 helix-turn-helix transcriptional regulator [Streptomyces aur... 11952.4e-164
WP_189152431.1 helix-turn-helix transcriptional regulator [Streptomyces lac... 11901.1e-163
WP_189837944.1 helix-turn-helix transcriptional regulator [Streptomyces umb... 11803.4e-162
WP_164320149.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 11692.0e-160
WP_210574371.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11649.4e-160
WP_071367232.1 helix-turn-helix transcriptional regulator [Streptomyces col... 11571.1e-158
GGX12046.1 transcriptional regulator [Streptomyces chartreusis] 11571.8e-158

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4022 Seems to have no N-terminal signal seq.