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IDSAVERM_5740 TypeCDS
From6941505 nt length1242
To6942746 aa length413
Gene pI6.45
Definitionputative regulatory protein M.W (Da)45889
NotePF02954: Bacterial regulatory protein, Fis family AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categoryregulation


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2426 possible regulatory protein2136.0e-66
sgrSGR_6470 putative regulatory protein5049.0e-180
samSAM23877_7159 putative regulatory protein1925.0e-58
scabSCAB63711 putative regulatory protein7190.0e+00
saceSACE_2353 transcriptional regulator, CdaR2317.0e-73

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_301PucR C-terminal helix-turn-helix domain341-39871.14.7e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202498463.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 18600.0e+00
WP_009306724.1 helix-turn-helix domain-containing protein [Streptomyces ipo... 17650.0e+00
WP_141567975.1 helix-turn-helix domain-containing protein [Streptomyces ipo... 17580.0e+00
WP_189781193.1 helix-turn-helix domain-containing protein [Streptomyces cap... 17560.0e+00
WP_141583338.1 helix-turn-helix domain-containing protein [Streptomyces ipo... 17550.0e+00
WP_055617877.1 helix-turn-helix domain-containing protein [Streptomyces pha... 17550.0e+00
WP_189185280.1 helix-turn-helix domain-containing protein [Streptomyces alb... 17530.0e+00
WP_149825467.1 helix-turn-helix domain-containing protein [Streptomyces tai... 17510.0e+00
17500.0e+00
17490.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.0803 Seems to have no N-terminal signal seq.