| ID | SAVERM_5876
| Type | CDS
|
| From | 7086257
| nt length | 591
|
| To | 7086847
| aa length | 196
|
| Gene |
| pI | 4.83
|
| Definition | hypothetical protein
| M.W (Da) | 21853
|
| Note | PF02591: Uncharacterized ACR, COG1579
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2300 hypothetical protein | 317 | 2.0e-112
|
| sgr | SGR_5213 conserved hypothetical protein | 300 | 5.0e-105
|
| sam | SAM23877_2375 hypothetical protein | 321 | 8.0e-113
|
| scab | SCAB65651 hypothetical protein | 330 | 1.0e-117
|
| sace | SACE_1583 hypothetical protein | 144 | 8.0e-44
|
| nfar | nfa16390 hypothetical protein | 128 | 2.9e-31
|
| mtub | gi|15609366 hypothetical protein Rv2229c [Mycobacterium tuberculosis H37Rv] | 116 | 1.2e-27
|
| cglu | gi|19553437 COG1579:Zn-ribbon protein, possibly nucleic acid-binding [Corynebacterium glutamicum] | 67 | 5.7e-13
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| zf-RING_7 | 1 | C4-type zinc ribbon domain | 154-188 | 47.1 | 1.8e-12
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_168500980.1 | MULTISPECIES: C4-type zinc ribbon domain-containing protein ...
| 811 | 8.9e-108 |
| KOG88025.1 | Zn-ribbon-like protein [Streptomyces varsoviensis]
| 800 | 1.0e-106 |
| SDN19285.1 | hypothetical protein SAMN05444921_121100 [Streptomyces wuyuanens...
| 798 | 3.9e-106 |
| WP_030876113.1 | C4-type zinc ribbon domain-containing protein [Streptomyces ...
| 800 | 4.4e-106 |
| WP_095854969.1 | C4-type zinc ribbon domain-containing protein [Streptomyces ...
| 798 | 8.8e-106 |
| QIZ01584.1 | hypothetical protein HEP87_17935 [Streptomyces sp. S1D4-11]
| 798 | 9.2e-106 |
| WP_208868055.1 | C4-type zinc ribbon domain-containing protein [Streptomyces ...
| 797 | 9.5e-106 |
| WP_206307389.1 | MULTISPECIES: C4-type zinc ribbon domain-containing protein ...
| 797 | 1.3e-105 |
| WP_075026578.1 | C4-type zinc ribbon domain-containing protein [Streptomyces ...
| 795 | 2.2e-105 |
| WP_179332404.1 | C4-type zinc ribbon domain-containing protein [Streptomyces ...
| 794 | 2.8e-105 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.5955 | Seems to have no N-terminal signal seq.
|