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IDSAVERM_5919 TypeCDS
From7131857 nt length999
To7132855 aa length332
Gene pI6.4
Definitionhypothetical protein M.W (Da)35254
NotePF09243: Mitochondrial small ribosomal subunit Rsm22 AseI frg.F
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2282 hypothetical protein4736.0e-170
sgrSGR_5232 conserved hypothetical protein4413.0e-157
samSAM23877_2357 hypothetical protein5140.0e+00
scabSCAB66181 hypothetical protein5290.0e+00

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Rsm221Mitochondrial small ribosomal subunit Rsm2253-325395.41.1e-118

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202498496.1 small ribosomal subunit Rsm22 family protein [Streptomyces s... 13024.4e-179
WP_212727514.1 small ribosomal subunit Rsm22 family protein [Streptomyces m... 12053.3e-164
WP_095855008.1 small ribosomal subunit Rsm22 family protein [Streptomyces s... 12053.6e-164
WP_097226117.1 small ribosomal subunit Rsm22 family protein [Streptomyces s... 12021.0e-163
WP_190168579.1 small ribosomal subunit Rsm22 family protein [Streptomyces m... 12002.1e-163
WP_099922998.1 small ribosomal subunit Rsm22 family protein [Streptomyces s... 11993.1e-163
WP_168490841.1 small ribosomal subunit Rsm22 family protein [Streptomyces s... 11976.5e-163
WP_067363264.1 small ribosomal subunit Rsm22 family protein [Streptomyces o... 11967.8e-163
QIY95509.1 rRNA methyltransferase [Streptomyces sp. S1D4-11] 11951.3e-162
WP_181651549.1 small ribosomal subunit Rsm22 family protein [Streptomyces s... 11932.5e-162

PSORT result

LocalizationCertaintyPSORT said
membrane0.2699 Seems to have no N-terminal signal seq.