| ID | SAVERM_6050
| Type | CDS
|
| From | 7283820
| nt length | 1266
|
| To | 7285085
| aa length | 421
|
| Gene | lppS
| pI | 7.34
|
| Definition | putative lipoprotein
| M.W (Da) | 44770
|
| Note | PF03734: ErfK/YbiS/YcfS/YnhG
| AseI frg. | F
|
| SignalP v.4.0 | Signal peptide | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2153 putative secreted protein | 617 | 0.0e+00
|
| sgr | SGR_5355 putative secreted protein | 603 | 0.0e+00
|
| sam | SAM23877_2249 Secreted protein | 648 | 0.0e+00
|
| scab | SCAB67321 putative lipoprotein | 606 | 0.0e+00
|
| sace | SACE_1291 ErfK/YbiS/YcfS/YnhG | 228 | 2.0e-71
|
| nfar | nfa12820 hypothetical protein | 229 | 4.4e-61
|
| mtub | gi|15609655 PROBABLE CONSERVED LIPOPROTEIN LPPS [Mycobacterium tuberculosis H37Rv] | 236 | 2.1e-63
|
| cglu | gi|19553673 COG1376:Uncharacterized BCR [Corynebacterium glutamicum] | 230 | 8.2e-62
|
| bsub | BG12152 ydfE; hypothetical protein | 30 | 2.0e-01
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| YkuD | 1 | L,D-transpeptidase catalytic domain | 248-369 | 58.2 | 1.1e-15
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_081216797.1 | Ig-like domain-containing protein [Streptomyces sp. M41(2017...
| 1883 | 0.0e+00 |
| WP_164373930.1 | Ig-like domain-containing protein [Streptomyces sp. SID14446...
| 1881 | 0.0e+00 |
| WP_043675547.1 | Ig-like domain-containing protein [Streptomyces xylophagus]
| 1833 | 0.0e+00 |
| WP_033284402.1 | Ig-like domain-containing protein [Streptomyces sp. NRRL F-5...
| 1802 | 0.0e+00 |
| WP_151484326.1 | Ig-like domain-containing protein [Streptomyces albicerus]
| 1794 | 0.0e+00 |
| WP_165262566.1 | Ig-like domain-containing protein [Streptomyces scabichelini...
| 1790 | 0.0e+00 |
| WP_138049499.1 | Ig-like domain-containing protein [Streptomyces montanus] >l...
| 1790 | 0.0e+00 |
| WP_128429251.1 | Ig-like domain-containing protein [Streptomyces cyaneus]
| 1787 | 0.0e+00 |
| WP_030596824.1 | Ig-like domain-containing protein [Streptomyces fulvoviolace...
| 1786 | 0.0e+00 |
| WP_099500924.1 | MULTISPECIES: Ig-like domain-containing protein [Streptomyce...
| 1785 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | | May be a lipoprotein
|