| ID | SAVERM_6069
| Type | CDS
|
| From | 7307315
| nt length | 1797
|
| To | 7305519
| aa length | 598
|
| Gene | fadD14
| pI | 6.46
|
| Definition | putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase
| M.W (Da) | 64335
|
| Note | PF00501: AMP-binding enzyme
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of lipids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2131 putative long chain fatty acid coA ligase | 1134 | 0.0e+00
|
| sgr | SGR_5372 putative long-chain-fatty-acid:CoA ligase | 1060 | 0.0e+00
|
| sam | SAM23877_2228 Long-chain-fatty-acid--CoA ligase FadD15 | 1127 | 0.0e+00
|
| scab | SCAB67501 putative acyl-CoA synthetase | 1130 | 0.0e+00
|
| sace | SACE_1694 putative long-chain fatty acid ligase | 695 | 0.0e+00
|
| nfar | nfa47040 acyl-CoA synthetase | 600 | 1.4e-172
|
| mtub | gi|15609324 Probable long-chain-fatty-acid-CoA ligase fadD15 (FATTY-ACID-CoA SYNTHETASE) (FATTY-ACID-CoA SYNTHASE) [Mycobacterium tuberculosis H37Rv] | 601 | 3.8e-173
|
| cglu | gi|19553494 COG1022:Long-chain acyl-CoA synthetases (AMP-forming) [Corynebacterium glutamicum] | 541 | 4.3e-155
|
| paer | PA1617 [gene=PA1617] [prot=probable AMP-binding enzyme] [comment=PA1617] | 214 | 1.4e-56
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| AMP-binding | 1 | AMP-binding enzyme | 23-466 | 348.7 | 3.4e-104
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_168490631.1 | MULTISPECIES: long-chain fatty acid--CoA ligase [Streptomyce...
| 3041 | 0.0e+00 |
| WP_075026426.1 | long-chain fatty acid--CoA ligase [Streptomyces mirabilis] >...
| 3040 | 0.0e+00 |
| QIY95383.1 | AMP-binding protein [Streptomyces sp. S1D4-11]
| 3038 | 0.0e+00 |
| WP_190170156.1 | long-chain fatty acid--CoA ligase [Streptomyces mirabilis] >...
| 3037 | 0.0e+00 |
| WP_067363618.1 | long-chain fatty acid--CoA ligase [Streptomyces olivochromog...
| 3036 | 0.0e+00 |
| WP_060902048.1 | MULTISPECIES: long-chain fatty acid--CoA ligase [unclassifie...
| 3032 | 0.0e+00 |
| WP_217573026.1 | long-chain fatty acid--CoA ligase [Streptomyces sp. GbtcB7]
| 3032 | 0.0e+00 |
| WP_181651599.1 | long-chain fatty acid--CoA ligase [Streptomyces sp. WAC00263...
| 3031 | 0.0e+00 |
| WP_144315346.1 | long-chain fatty acid--CoA ligase [Streptomyces sp. RLB3-17]...
| 3030 | 0.0e+00 |
| WP_097284333.1 | long-chain fatty acid--CoA ligase [Streptomyces sp. OK228] >...
| 3028 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1871 | Seems to have no N-terminal signal seq.
|