| ID | SAVERM_6110
| Type | CDS
|
| From | 7349633
| nt length | 2388
|
| To | 7347246
| aa length | 795
|
| Gene |
| pI | 9.78
|
| Definition | putative membrane protein
| M.W (Da) | 84083
|
| Note | PF01841: Transglutaminase-like superfamily
| AseI frg. | F
|
| SignalP v.4.0 | Signal peptide | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2096 putative membrane protein | 1041 | 0.0e+00
|
| sgr | SGR_5409 putative membrane protein | 881 | 0.0e+00
|
| sam | SAM23877_2187 conserved membrane protein of unknown function | 1106 | 0.0e+00
|
| scab | SCAB67881 putative membrane protein | 1006 | 0.0e+00
|
| sace | SACE_5871 transglutaminase-like | 199 | 9.0e-55
|
| mtub | gi|15608811 hypothetical protein Rv1673c [Mycobacterium tuberculosis H37Rv] | 51 | 1.5e-07
|
| bsub | BG12213 yebA; similar to hypothetical proteins | 99 | 7.3e-22
|
| paer | PA2873 [gene=PA2873] [prot=hypothetical protein] [comment=PA2873] | 56 | 1.1e-08
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Transglut_core | 1 | Transglutaminase-like superfamily | 432-546 | 87.0 | 1e-24
|
| DUF4129 | 1 | Domain of unknown function (DUF4129) | 667-733 | 33.6 | 3.3e-08
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189187760.1 | DUF3488 and transglutaminase-like domain-containing protein ...
| 2521 | 0.0e+00 |
| WP_168527707.1 | DUF3488 and transglutaminase-like domain-containing protein ...
| 2518 | 0.0e+00 |
| WP_168490606.1 | MULTISPECIES: DUF3488 and transglutaminase-like domain-conta...
| 2511 | 0.0e+00 |
| QIY95353.1 | transglutaminase domain-containing protein [Streptomyces sp. S1D4...
| 2505 | 0.0e+00 |
| WP_095933718.1 | DUF3488 and transglutaminase-like domain-containing protein ...
| 2504 | 0.0e+00 |
| WP_190170174.1 | DUF3488 and transglutaminase-like domain-containing protein ...
| 2496 | 0.0e+00 |
| WP_099925731.1 | DUF3488 and transglutaminase-like domain-containing protein ...
| 2493 | 0.0e+00 |
| WP_037765464.1 | DUF3488 and transglutaminase-like domain-containing protein ...
| 2481 | 0.0e+00 |
| WP_143607841.1 | MULTISPECIES: DUF3488 and transglutaminase-like domain-conta...
| 2475 | 0.0e+00 |
| WP_097284313.1 | MULTISPECIES: DUF3488 and transglutaminase-like domain-conta...
| 2473 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5288 | Seems to have a cleavable N-term signal seq.
|