| ID | SAVERM_6149
| Type | CDS
|
| From | 7396885
| nt length | 501
|
| To | 7396385
| aa length | 166
|
| Gene |
| pI | 8.47
|
| Definition | putative transcriptional regulator
| M.W (Da) | 16945
|
| Note | PF04073: YbaK / prolyl-tRNA synthetases associated domain
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2058 putative transcriptional regulatory protein | 288 | 6.0e-102
|
| sgr | SGR_5446 conserved hypothetical protein | 264 | 1.0e-92
|
| sam | SAM23877_2145 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK | 281 | 2.0e-99
|
| scab | SCAB68311 putative transcriptional regulator | 275 | 6.0e-97
|
| sace | SACE_6431 transcriptional regulatory protein | 171 | 3.0e-56
|
| nfar | nfa45850 hypothetical protein | 162 | 1.0e-41
|
| mtub | gi|57117077 hypothetical protein Rv3224B [Mycobacterium tuberculosis H37Rv] | 60 | 7.5e-11
|
| cglu | gi|19551614 COG2606:Uncharacterized ACR [Corynebacterium glutamicum] | 132 | 8.5e-33
|
| bsub | BG13181 yjdI; similar to transcriptional regulator | 92 | 9.2e-21
|
| ecoli | gi|16128465 hypothetical protein b0481 [Escherichia coli K12] | 159 | 6.9e-41
|
| paer | PA3580 [gene=PA3580] [prot=conserved hypothetical protein] [comment=PA3580] | 165 | 1.7e-42
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| tRNA_edit | 1 | Aminoacyl-tRNA editing domain | 42-155 | 96.9 | 7.9e-28
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2763 | Seems to have a cleavable N-term signal seq.
|