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IDSAVERM_6244 TypeCDS
From7502471 nt length588
To7501884 aa length195
Gene pI4.89
Definitionhypothetical protein M.W (Da)19515
NotePF01042: Endoribonuclease L-PSP AseI frg.F
SignalP v.4.0Signal peptide | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1987 hypothetical protein2415.0e-83
sgrSGR_1509 putative endoribonuclease836.0e-21
samSAM23877_2069 hypothetical protein2112.0e-71
scabSCAB69201 hypothetical protein2334.0e-80
saceSACE_3661 ribonuclease933.0e-25
ecoligi|16130033 putative tagatose 6-phosphate kinase 1 [Escherichia coli K12]321.7e-02
paerPA5392 [gene=PA5392] [prot=conserved hypothetical protein] [comment=PA5392]639.0e-12

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribonuc_L-PSP1Endoribonuclease L-PSP58-17364.01.2e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202497542.1 RidA family protein [Streptomyces sp. SID5469] 7256.1e-96
WP_028806002.1 RidA family protein [Streptomyces sp. 142MFCol3.1] 6011.4e-77
WP_229703193.1 RidA family protein [Streptomyces albiflavescens] >dbj 5993.6e-77
NUP44479.1 RidA family protein [Streptomyces sp.] 5993.7e-77
CAD55289.1 conserved hypothetical protein [Streptomyces coelicolor A3(2)] 6005.9e-77
WP_095933599.1 RidA family protein [Streptomyces sp. Tue6028] >gb 5977.1e-77
WP_203697673.1 RidA family protein [Streptomyces rubrogriseus] 5987.9e-77
EFD69919.1 conserved hypothetical protein [Streptomyces lividans TK24] 5998.2e-77
WP_071367866.1 RidA family protein [Streptomyces colonosanans] >gb 5969.2e-77
WP_055542129.1 RidA family protein [Streptomyces neyagawaensis] 5932.7e-76

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2959 Seems to have no N-terminal signal seq.