| ID | SAVERM_6315
| Type | CDS
|
| From | 7584490
| nt length | 2088
|
| To | 7582403
| aa length | 695
|
| Gene | tkt2
| pI | 5.02
|
| Definition | putative transketolase
| M.W (Da) | 74950
|
| Note | PF00456: Transketolase, thiamine diphosphate binding domain
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | main glycolytic pathways
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1935 probable transketolase | 1290 | 0.0e+00
|
| sgr | SGR_5588 putative transketolase | 1267 | 0.0e+00
|
| sam | SAM23877_2005 Transketolase | 1278 | 0.0e+00
|
| scab | SCAB69921 putative transketolase | 1241 | 0.0e+00
|
| sace | SACE_2160 transketolase | 882 | 0.0e+00
|
| mtub | gi|15608587 transketolase [Mycobacterium tuberculosis H37Rv] | 863 | 0.0e+00
|
| ecoli | gi|49176286 transketolase [Escherichia coli K12] | 566 | 1.6e-162
|
| paer | PA0548 [gene=tktA] [prot=transketolase] [comment=PA0548] | 584 | 1.0e-167
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Transketolase_N | 1 | Transketolase, thiamine diphosphate binding domain | 16-355 | 468.1 | 1.2e-140
|
| Transket_pyr | 1 | Transketolase, pyrimidine binding domain | 370-533 | 147.0 | 4.2e-43
|
| Transketolase_C | 1 | Transketolase, C-terminal domain | 576-682 | 42.4 | 5.3e-11
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2319 | Seems to have no N-terminal signal seq.
|