| ID | SAVERM_6322
| Type | CDS
|
| From | 7591157
| nt length | 933
|
| To | 7590225
| aa length | 310
|
| Gene |
| pI | 6.26
|
| Definition | putative ABC transporter ATP-binding protein
| M.W (Da) | 32989
|
| Note | PF00005: ABC transporter
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1928 putative ABC transporter ATP-binding subunit | 561 | 0.0e+00
|
| sgr | SGR_5593 putative ABC transporter ATP-binding protein | 520 | 0.0e+00
|
| sam | SAM23877_1999 ABC transporter | 568 | 0.0e+00
|
| scab | SCAB70001 putative ABC transporter ATP-binding protein | 559 | 0.0e+00
|
| sace | SACE_2171 putative ABC transporter ATP-binding protein | 340 | 5.0e-118
|
| nfar | nfa35650 ABC transporter ATP-binding protein | 349 | 1.5e-97
|
| mtub | gi|15608596 PROBABLE UNIDENTIFIED ANTIBIOTIC-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER [Mycobacterium tuberculosis H37Rv] | 346 | 1.3e-96
|
| cglu | gi|19552780 COG1131:ABC-type multidrug transport system, ATPase component [Corynebacterium glutamicum] | 270 | 8.3e-74
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 1 | ABC transporter | 36-163 | 74.1 | 1.4e-20
|
| AAA_21 | 1 | AAA domain, putative AbiEii toxin, Type IV TA system | 130-193 | 48.6 | 8.9e-13
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189187552.1 | ABC transporter ATP-binding protein [Streptomyces albiflaves...
| 1509 | 0.0e+00 |
| WP_053741501.1 | ABC transporter ATP-binding protein [Streptomyces sp. NRRL W...
| 1502 | 0.0e+00 |
| WP_165255824.1 | ABC transporter ATP-binding protein [Streptomyces scabicheli...
| 1500 | 0.0e+00 |
| WP_119106041.1 | ABC transporter ATP-binding protein [Streptomyces sporangiif...
| 1499 | 0.0e+00 |
| WP_093625406.1 | ABC transporter ATP-binding protein [Streptomyces sp. 3213.3...
| 1499 | 0.0e+00 |
| WP_026178366.1 | ABC transporter ATP-binding protein [Streptomyces hokutonens...
| 1498 | 0.0e+00 |
| WP_200717709.1 | MULTISPECIES: ABC transporter ATP-binding protein [unclassif...
| 1496 | 0.0e+00 |
| WP_126391091.1 | ABC transporter ATP-binding protein [Streptomyces cyaneochro...
| 1496 | 0.0e+00 |
| WP_078623029.1 | ABC transporter ATP-binding protein [Streptomyces prunicolor...
| 1496 | 0.0e+00 |
| WP_165340013.1 | ABC transporter ATP-binding protein [Streptomyces ureilyticu...
| 1495 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1030 | Seems to have no N-terminal signal seq.
|