| ID | SAVERM_6326
| Type | CDS
|
| From | 7593919
| nt length | 1182
|
| To | 7595100
| aa length | 393
|
| Gene | sufD
| pI | 4.55
|
| Definition | putative FeS assembly protein SufD
| M.W (Da) | 41815
|
| Note | PF01458: Uncharacterized protein family (UPF0051)
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1924 conserved hypothetical protein | 743 | 0.0e+00
|
| sgr | SGR_5596 conserved hypothetical protein | 714 | 0.0e+00
|
| sam | SAM23877_1995 hypothetical protein | 736 | 0.0e+00
|
| scab | SCAB70041 putative FeS assembly protein SufD | 739 | 0.0e+00
|
| sace | SACE_2175 FeS assembly protein | 456 | 4.0e-161
|
| nfar | nfa35590 hypothetical protein | 460 | 1.1e-130
|
| mtub | gi|15608600 hypothetical protein Rv1462 [Mycobacterium tuberculosis H37Rv] | 436 | 1.3e-123
|
| cglu | gi|19552776 COG0719:Predicted membrane components of an uncharacterized iron-regulated ABC-type transporter SufB [Corynebacterium glutamicum] | 384 | 5.3e-108
|
| ecoli | gi|16129637 required for stability of iron-sulfur component of FhuF [Escherichia coli K12] | 95 | 7.0e-21
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| UPF0051 | 1 | Uncharacterized protein family (UPF0051) | 145-364 | 239.3 | 3.5e-71
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_123964376.1 | Fe-S cluster assembly protein SufD [Streptomyces sp. TLI_185...
| 1988 | 0.0e+00 |
| WP_099923316.1 | Fe-S cluster assembly protein SufD [Streptomyces mirabilis] ...
| 1986 | 0.0e+00 |
| WP_210575749.1 | Fe-S cluster assembly protein SufD [Streptomyces sp. GESEQ-4...
| 1985 | 0.0e+00 |
| WP_093907211.1 | Fe-S cluster assembly protein SufD [Streptomyces sp. cf386] ...
| 1984 | 0.0e+00 |
| WP_030677265.1 | Fe-S cluster assembly protein SufD [Streptomyces cellulosae]
| 1984 | 0.0e+00 |
| WP_165255816.1 | Fe-S cluster assembly protein SufD [Streptomyces scabichelin...
| 1983 | 0.0e+00 |
| WP_168490443.1 | MULTISPECIES: Fe-S cluster assembly protein SufD [Streptomyc...
| 1983 | 0.0e+00 |
| WP_128437114.1 | Fe-S cluster assembly protein SufD [Streptomyces cyaneus]
| 1983 | 0.0e+00 |
| WP_217571474.1 | Fe-S cluster assembly protein SufD [Streptomyces sp. GbtcB7]
| 1983 | 0.0e+00 |
| WP_067364238.1 | Fe-S cluster assembly protein SufD [Streptomyces olivochromo...
| 1982 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0083 | Seems to have no N-terminal signal seq.
|