| ID | SAVERM_6328
| Type | CDS
|
| From | 7595428
| nt length | 783
|
| To | 7596210
| aa length | 260
|
| Gene | sufC
| pI | 5.1
|
| Definition | putative iron-regulated ABC transporter ATP-binding protein
| M.W (Da) | 28302
|
| Note | PF00005: ABC transporter
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1922 putative ABC transporter ATP-binding subunit | 486 | 1.0e-177
|
| sgr | SGR_5598 putative ABC transporter ATP-binding protein | 478 | 3.0e-174
|
| sam | SAM23877_1993 component of SufBCD complex, ATP-binding component of ABC superfamily | 486 | 1.0e-177
|
| scab | SCAB70061 putative iron-regulated ABC transporter ATP-binding protein | 483 | 5.0e-176
|
| sace | SACE_2176 putative ABC transporter ATP-binding protein | 395 | 1.0e-141
|
| nfar | nfa35580 ABC transporter ATP-binding protein | 387 | 5.3e-109
|
| mtub | gi|15608601 PROBABLE CONSERVED ATP-BINDING PROTEIN ABC TRANSPORTER [Mycobacterium tuberculosis H37Rv] | 380 | 3.8e-107
|
| cglu | gi|19552775 COG0396:Iron-regulated ABC transporter ATPase subunit SufC [Corynebacterium glutamicum] | 362 | 9.8e-102
|
| bsub | BG14011 yurY; ABC transport system ATP-binding protein | 292 | 1.2e-80
|
| ecoli | gi|16129638 putative ATP-binding component of a transport system [Escherichia coli K12] | 237 | 6.7e-64
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 1 | ABC transporter | 23-174 | 78.5 | 6.4e-22
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_101405823.1 | MULTISPECIES: Fe-S cluster assembly ATPase SufC [Streptomyce...
| 1335 | 0.0e+00 |
| WP_075026223.1 | MULTISPECIES: Fe-S cluster assembly ATPase SufC [Streptomyce...
| 1330 | 0.0e+00 |
| WP_099923317.1 | MULTISPECIES: Fe-S cluster assembly ATPase SufC [Streptomyce...
| 1330 | 0.0e+00 |
| WP_054235895.1 | MULTISPECIES: Fe-S cluster assembly ATPase SufC [unclassifie...
| 1325 | 0.0e+00 |
| WP_095855311.1 | Fe-S cluster assembly ATPase SufC [Streptomyces sp. Ag82_O1-...
| 1324 | 0.0e+00 |
| WP_067364240.1 | Fe-S cluster assembly ATPase SufC [Streptomyces olivochromog...
| 1320 | 0.0e+00 |
| WP_153291238.1 | Fe-S cluster assembly ATPase SufC [Streptomyces fagopyri] >g...
| 1318 | 0.0e+00 |
| WP_073942331.1 | Fe-S cluster assembly ATPase SufC [Streptomyces sp. TSRI0107...
| 1309 | 0.0e+00 |
| NEE06772.1 | Fe-S cluster assembly ATPase SufC [Streptomyces sp. SID7499]
| 1309 | 0.0e+00 |
| WP_104779534.1 | MULTISPECIES: Fe-S cluster assembly ATPase SufC [Streptomyce...
| 1308 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2670 | Seems to have no N-terminal signal seq.
|