| ID | SAVERM_6360
| Type | CDS
|
| From | 7630125
| nt length | 942
|
| To | 7631066
| aa length | 313
|
| Gene |
| pI | 5.05
|
| Definition | putative 5-dehydro-4-deoxyglucarate dehydratase
| M.W (Da) | 33424
|
| Note | PF00701: Dihydrodipicolinate synthetase family
| AseI frg. | F
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1895 putative dihydropicolinate synthase | 521 | 0.0e+00
|
| sgr | SGR_5617 putative dihydrodipicolinate synthase | 453 | 2.0e-162
|
| sam | SAM23877_1969 putative 5-dehydro-4-deoxyglucarate dehydratase 1 | 530 | 0.0e+00
|
| scab | SCAB70381 putative dihydrodipicolinate synthase | 501 | 0.0e+00
|
| sace | SACE_0344 5-dehydro-4-deoxyglucarate dehydratase | 219 | 1.0e-70
|
| nfar | nfa35040 5-dehydro-4-deoxyglucarate dehydratase | 243 | 1.2e-65
|
| cglu | gi|19551698 COG0329:Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Corynebacterium glutamicum] | 194 | 5.9e-51
|
| bsub | BG11158 ycbC; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] | 207 | 6.5e-55
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DHDPS | 1 | Dihydrodipicolinate synthetase family | 16-302 | 180.1 | 3.5e-53
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498572.1 | 5-dehydro-4-deoxyglucarate dehydratase [Streptomyces sp. SID...
| 1339 | 0.0e+00 |
| WP_168527516.1 | 5-dehydro-4-deoxyglucarate dehydratase [Streptomyces sp. RPA...
| 1310 | 1.0e-180 |
| WP_081223737.1 | 5-dehydro-4-deoxyglucarate dehydratase [Streptomyces sp. M41...
| 1309 | 1.4e-180 |
| NEB29277.1 | 5-dehydro-4-deoxyglucarate dehydratase [Streptomyces sp. SID14446...
| 1308 | 1.7e-180 |
| WP_095858164.1 | MULTISPECIES: 5-dehydro-4-deoxyglucarate dehydratase [unclas...
| 1303 | 2.1e-179 |
| WP_189187507.1 | 5-dehydro-4-deoxyglucarate dehydratase [Streptomyces albifla...
| 1300 | 2.8e-179 |
| QIY95134.1 | 5-dehydro-4-deoxyglucarate dehydratase [Streptomyces sp. S1D4-11]
| 1301 | 4.4e-179 |
| WP_168490420.1 | MULTISPECIES: 5-dehydro-4-deoxyglucarate dehydratase [Strept...
| 1300 | 4.7e-179 |
| WP_229888999.1 | 5-dehydro-4-deoxyglucarate dehydratase [Streptomyces mirabil...
| 1299 | 1.2e-178 |
| WP_225900259.1 | 5-dehydro-4-deoxyglucarate dehydratase [Streptomyces sp. RLB...
| 1298 | 1.6e-178 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0564 | Seems to have no N-terminal signal seq.
|