| ID | SAVERM_6426
| Type | CDS
|
| From | 7705394
| nt length | 1599
|
| To | 7706992
| aa length | 532
|
| Gene |
| pI | 6.02
|
| Definition | putative ABC transporter ATP-binding protein
| M.W (Da) | 57820
|
| Note | PF00005: ABC transporter
| AseI frg. | S
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1840 putative ABC transporter ATP binding protein | 1008 | 0.0e+00
|
| sgr | SGR_5653 putative ABC transporter ATP-binding protein | 984 | 0.0e+00
|
| sam | SAM23877_1911 putative ABC transporter ATP binding protein | 1014 | 0.0e+00
|
| scab | SCAB70961 putative ABC transporter ATP-binding protein | 1008 | 0.0e+00
|
| sace | SACE_2187 ABC transporter, ATP-binding protein | 724 | 0.0e+00
|
| nfar | nfa34880 ABC transporter ATP-binding protein | 704 | 0.0e+00
|
| mtub | gi|15608611 PROBABLE MACROLIDE-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER [Mycobacterium tuberculosis H37Rv] | 677 | 0.0e+00
|
| cglu | gi|19552767 COG0488:ATPase components of ABC transporters with duplicated ATPase domains [Corynebacterium glutamicum] | 628 | 0.0e+00
|
| bsub | BG12203 ydiF; ABC transport system ATP-binding protein | 291 | 4.9e-80
|
| ecoli | gi|16131231 putative ATP-binding component of a transport system [Escherichia coli K12] | 270 | 1.3e-73
|
| paer | PA5252 [gene=PA5252] [prot=probable ATP-binding component of ABC transporter] [comment=PA5252] | 253 | 4.0e-68
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 2 | ABC transporter | 19-187, 342-471 | 175.4 | 7.2e-52
|
| AAA_21 | 1 | AAA domain, putative AbiEii toxin, Type IV TA system | 426-498 | 73.0 | 3.4e-20
|
| ABC_tran_Xtn | 1 | ABC transporter | 230-313 | 29.0 | 7.2e-07
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498585.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 2591 | 0.0e+00 |
| WP_093907314.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 2534 | 0.0e+00 |
| WP_030947929.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 2529 | 0.0e+00 |
| NUQ96065.1 | ABC-F family ATP-binding cassette domain-containing protein [Stre...
| 2526 | 0.0e+00 |
| WP_043374489.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 2526 | 0.0e+00 |
| AZQ33857.1 | ABC-F family ATP-binding cassette domain-containing protein [Stre...
| 2526 | 0.0e+00 |
| WP_123964288.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 2525 | 0.0e+00 |
| WP_093773733.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 2523 | 0.0e+00 |
| WP_030679309.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 2522 | 0.0e+00 |
| WP_217254171.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 2522 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1977 | Seems to have no N-terminal signal seq.
|