| ID | SAVERM_6437
| Type | CDS
|
| From | 7715372
| nt length | 798
|
| To | 7714575
| aa length | 265
|
| Gene |
| pI | 8.03
|
| Definition | putative membrane protein
| M.W (Da) | 28863
|
| Note |
| AseI frg. | S
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1829 putative membrane protein | 333 | 3.0e-116
|
| sgr | SGR_5664 putative membrane protein | 340 | 1.0e-119
|
| sam | SAM23877_1900 hypothetical protein | 342 | 4.0e-120
|
| scab | SCAB71141 putative membrane protein | 326 | 5.0e-114
|
| sace | SACE_1577 hypothetical protein | 99 | 2.0e-25
|
| nfar | nfa16300 hypothetical protein | 96 | 2.5e-21
|
| mtub | gi|15609372 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 108 | 3.7e-25
|
| cglu | gi|19553441 COG3346:Uncharacterized ACR [Corynebacterium glutamicum] | 89 | 1.7e-19
|
| paer | PA0110 [gene=PA0110] [prot=hypothetical protein] [comment=PA0110] | 63 | 1.9e-11
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| SURF1 | 1 | SURF1 family | 19-229 | 124.6 | 4.7e-36
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| outside | 0.3000 | Seems to have a cleavable N-term signal seq.
|