| ID | SAVERM_6470
| Type | CDS
|
| From | 7747667
| nt length | 1215
|
| To | 7746453
| aa length | 404
|
| Gene | serB2
| pI | 4.9
|
| Definition | putative 3-phosphoserine phosphatase
| M.W (Da) | 42688
|
| Note | PF00702: haloacid dehalogenase-like hydrolase
| AseI frg. | S
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1808 putative phosphoserine phosphatase | 688 | 0.0e+00
|
| sgr | SGR_5689 putative phosphoserine phosphatase | 684 | 0.0e+00
|
| sam | SAM23877_1875 Phosphoserine phosphatase | 704 | 0.0e+00
|
| scab | SCAB71401 putative 3-phosphoserine phosphatase | 741 | 0.0e+00
|
| sace | SACE_1188 phosphoserine phosphatase | 414 | 2.0e-144
|
| nfar | nfa42930 serB phosphoserine phosphatase | 411 | 4.6e-116
|
| mtub | gi|15610179 phosphoserine phosphatase [Mycobacterium tuberculosis H37Rv] | 357 | 1.0e-99
|
| cglu | gi|19553721 COG3830:ACT domain-containing protein [Corynebacterium glutamicum] | 365 | 2.7e-102
|
| ecoli | gi|16132205 3-phosphoserine phosphatase [Escherichia coli K12] | 202 | 4.2e-53
|
| paer | PA4960 [gene=PA4960] [prot=probable phosphoserine phosphatase] [comment=PA4960] | 260 | 1.4e-70
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| HAD | 1 | haloacid dehalogenase-like hydrolase | 184-351 | 84.8 | 9.2e-24
|
| ACT_6 | 1 | ACT domain | 11-84 | 65.2 | 3.6e-18
|
| Hydrolase | 1 | haloacid dehalogenase-like hydrolase | 182-355 | 60.5 | 2.5e-16
|
| Hydrolase_3 | 1 | haloacid dehalogenase-like hydrolase | 319-372 | 41.3 | 1.4e-10
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_033286417.1 | phosphoserine phosphatase SerB [Streptomyces sp. NRRL F-525]
| 1748 | 0.0e+00 |
| WP_019067398.1 | phosphoserine phosphatase SerB [Streptomyces hokutonensis]
| 1744 | 0.0e+00 |
| WP_186281777.1 | phosphoserine phosphatase SerB [Streptomyces sp. PSKA01] >lc...
| 1743 | 0.0e+00 |
| WP_019060694.1 | phosphoserine phosphatase SerB [Streptomyces prunicolor]
| 1742 | 0.0e+00 |
| WP_210593170.1 | phosphoserine phosphatase SerB [Streptomyces sp. GESEQ-35]
| 1739 | 0.0e+00 |
| WP_189865337.1 | phosphoserine phosphatase SerB [Streptomyces poonensis] >dbj...
| 1738 | 0.0e+00 |
| WP_054232222.1 | MULTISPECIES: phosphoserine phosphatase SerB [unclassified S...
| 1737 | 0.0e+00 |
| WP_143601244.1 | MULTISPECIES: phosphoserine phosphatase SerB [unclassified S...
| 1737 | 0.0e+00 |
| WP_200711684.1 | phosphoserine phosphatase SerB [Streptomyces sp. MBT62] >lcl...
| 1737 | 0.0e+00 |
| WP_152863299.1 | phosphoserine phosphatase SerB [Streptomyces acidicola] >gb
| 1737 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1426 | Seems to have no N-terminal signal seq.
|