| ID | SAVERM_6480
| Type | CDS
|
| From | 7759495
| nt length | 792
|
| To | 7760286
| aa length | 263
|
| Gene |
| pI | 4.74
|
| Definition | putative ABC transporter ATP-binding protein
| M.W (Da) | 28862
|
| Note | PF00005: ABC transporter
| AseI frg. | S
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1798 putative ABC transporter ATP-binding subunit | 500 | 0.0e+00
|
| sgr | SGR_5698 putative ABC transporter ATP-binding protein | 474 | 1.0e-172
|
| sam | SAM23877_1865 putative ABC transporter ATP-binding protein YlmA | 502 | 0.0e+00
|
| scab | SCAB71511 putative ABC transporter ATP-binding protein | 486 | 3.0e-177
|
| sace | SACE_6208 ABC transporter, ATP-binding component | 274 | 2.0e-93
|
| nfar | nfa42910 ABC transporter ATP-binding protein | 294 | 6.1e-81
|
| mtub | gi|15610178 PROBABLE CONSERVED ATP-BINDING PROTEIN ABC TRANSPORTER [Mycobacterium tuberculosis H37Rv] | 273 | 1.1e-74
|
| cglu | gi|19552448 COG1119:ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Corynebacterium glutamicum] | 265 | 2.2e-72
|
| bsub | BG13370 ylmA; ABC transport system ATP-binding protein | 197 | 5.3e-52
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 1 | ABC transporter | 21-171 | 96.3 | 2e-27
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_075026798.1 | ABC transporter ATP-binding protein [Streptomyces mirabilis]
| 1324 | 0.0e+00 |
| SFE61876.1 | iron complex transport system ATP-binding protein [Streptomyces ...
| 1323 | 0.0e+00 |
| GAX50355.1 | ABC transporter ATP-binding protein [Streptomyces olivochromogen...
| 1323 | 0.0e+00 |
| WP_067364876.1 | ABC transporter ATP-binding protein [Streptomyces olivochrom...
| 1322 | 0.0e+00 |
| WP_033318092.1 | MULTISPECIES: ABC transporter ATP-binding protein [Streptomy...
| 1321 | 0.0e+00 |
| WP_165259794.1 | ABC transporter ATP-binding protein [Streptomyces scabicheli...
| 1319 | 0.0e+00 |
| WP_190037744.1 | ABC transporter ATP-binding protein [Streptomyces fructoferm...
| 1319 | 0.0e+00 |
| WP_168490324.1 | MULTISPECIES: ABC transporter ATP-binding protein [Streptomy...
| 1318 | 0.0e+00 |
| KPI14916.1 | Phosphonate-transporting ATPase [Actinobacteria bacterium OK006] ...
| 1317 | 0.0e+00 |
| WP_054230572.1 | MULTISPECIES: ABC transporter ATP-binding protein [Streptomy...
| 1316 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3087 | Seems to have no N-terminal signal seq.
|