| ID | SAVERM_6672
| Type | CDS
|
| From | 7983961
| nt length | 861
|
| To | 7983101
| aa length | 286
|
| Gene |
| pI | 5.32
|
| Definition | hypothetical protein
| M.W (Da) | 32301
|
| Note | PF10926: Protein of unknown function (DUF2800)
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1653 Hypothetical protein SCI41.36 | 507 | 0.0e+00
|
| sgr | SGR_5851 conserved hypothetical protein | 478 | 4.0e-173
|
| sam | SAM23877_1708 hypothetical protein | 499 | 0.0e+00
|
| scab | SCAB73381 hypothetical protein | 514 | 0.0e+00
|
| sace | SACE_2242 putative RecB family exonuclease | 285 | 3.0e-97
|
| nfar | nfa31830 hypothetical protein | 285 | 4.2e-78
|
| mtub | gi|15609256 hypothetical protein Rv2119 [Mycobacterium tuberculosis H37Rv] | 265 | 3.4e-72
|
| cglu | gi|19552714 COG2887:RecB family exonuclease [Corynebacterium glutamicum] | 245 | 1.5e-66
|
| bsub | BG13663 yoqD; DNA-binding protein | 27 | 1.1e+00
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| PDDEXK_1 | 1 | PD-(D/E)XK nuclease superfamily | 9-257 | 135.0 | 3.8e-39
|
| DUF2800 | 1 | Protein of unknown function (DUF2800) | 10-186 | 31.7 | 8.6e-08
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1114 | Seems to have no N-terminal signal seq.
|