| ID | SAVERM_6740
| Type | CDS
|
| From | 8055796
| nt length | 927
|
| To | 8056722
| aa length | 308
|
| Gene | tsnR2
| pI | 5.07
|
| Definition | putative rRNA methyltransferase
| M.W (Da) | 31977
|
| Note | PF00588: SpoU rRNA Methylase family
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | RNA modification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1597 putative rRNA methylase | 485 | 8.0e-176
|
| sgr | SGR_5908 putative rRNA methylase | 401 | 9.0e-143
|
| sam | SAM23877_1653 putative rRNA methylase | 491 | 4.0e-178
|
| scab | SCAB73991 putative rRNA methyltransferase | 489 | 1.0e-177
|
| sace | SACE_5278 23S ribosomal RNA methyltransferase | 192 | 4.0e-61
|
| nfar | nfa19170 ribosomal RNA methyltransferase | 218 | 6.9e-58
|
| mtub | gi|15608782 Possible 23S rRNA methyltransferase tsnR [Mycobacterium tuberculosis H37Rv] | 200 | 1.1e-52
|
| cglu | gi|19552605 COG0566:rRNA methylases [Corynebacterium glutamicum] | 197 | 6.8e-52
|
| bsub | BG12323 ysgA; similar to rRNA methylase | 110 | 1.4e-25
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| SpoU_methylase | 1 | SpoU rRNA Methylase family | 146-290 | 126.7 | 6.9e-37
|
| SpoU_sub_bind | 1 | RNA 2'-O ribose methyltransferase substrate binding | 57-132 | 42.1 | 7.2e-11
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2824 | Seems to have no N-terminal signal seq.
|