| ID | SAVERM_678
| Type | CDS
|
| From | 835665
| nt length | 363
|
| To | 836027
| aa length | 120
|
| Gene |
| pI | 6.35
|
| Definition | putative transcriptional regulator
| M.W (Da) | 13352
|
| Note | PF01638: Transcriptional regulator
| AseI frg. | A
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2481 hypothetical protein | 140 | 9.0e-45
|
| sgr | SGR_2551 putative transcriptional regulator | 146 | 9.0e-47
|
| sam | SAM23877_2534 Transcriptional regulator | 139 | 2.0e-44
|
| scab | SCAB44291 putative transcriptional regulator | 195 | 9.0e-67
|
| sace | SACE_1380 transcriptional regulator | 124 | 5.0e-39
|
| nfar | nfa38050 transcriptional regulator | 124 | 2.2e-30
|
| bsub | BG13316 ykvN; similar to hypothetical proteins from B. subtilis | 95 | 7.9e-22
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| HxlR | 1 | HxlR-like helix-turn-helix | 23-109 | 106.2 | 5.4e-31
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_007075551.1 | helix-turn-helix transcriptional regulator [Micromonospora s...
| 565 | 1.3e-73 |
| WP_071369248.1 | helix-turn-helix transcriptional regulator [Streptomyces col...
| 565 | 1.7e-73 |
| WP_132396672.1 | helix-turn-helix transcriptional regulator [Micromonospora s...
| 564 | 2.1e-73 |
| KUJ69830.1 | transcriptional regulator [Streptomyces albus subsp. albus]
| 563 | 3.5e-73 |
| WP_057582348.1 | helix-turn-helix transcriptional regulator [Streptomyces sp....
| 561 | 5.7e-73 |
| WP_161688912.1 | helix-turn-helix transcriptional regulator [Micromonospora r...
| 560 | 8.1e-73 |
| WP_190185819.1 | helix-turn-helix transcriptional regulator [Streptomyces cir...
| 560 | 8.2e-73 |
| WP_216587377.1 | helix-turn-helix transcriptional regulator [Streptomyces bra...
| 559 | 1.2e-72 |
| WP_091588348.1 | helix-turn-helix transcriptional regulator [Micromonospora k...
| 558 | 1.8e-72 |
|
| 557 | 2.3e-72 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2136 | Seems to have no N-terminal signal seq.
|