| ID | SAVERM_6790
| Type | CDS
|
| From | 8106979
| nt length | 780
|
| To | 8107758
| aa length | 259
|
| Gene | metI
| pI | 9.79
|
| Definition | putative ABC transporter permease protein
| M.W (Da) | 27171
|
| Note | PF00528: Binding-protein-dependent transport system inner membrane component
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1558 putative ABC transporter permease protein | 351 | 3.0e-124
|
| sgr | SGR_5979 putative ABC transporter permease protein | 263 | 7.0e-90
|
| sam | SAM23877_1613 DL-methionine transporter subunit, membrane component protein of ABC superfamily | 359 | 1.0e-127
|
| scab | SCAB74411 putative ABC transporter permease protein | 392 | 3.0e-140
|
| sace | SACE_0805 putative ABC transport system permease protein | 123 | 5.0e-35
|
| nfar | nfa44100 ABC transporter permease protein | 166 | 1.9e-42
|
| cglu | gi|19551867 COG2011:Permease component of an uncharacterized ABC transporter [Corynebacterium glutamicum] | 161 | 3.3e-41
|
| bsub | BG14014 yusB; putative unknown ABC transport system permease protein | 191 | 2.8e-50
|
| ecoli | gi|16128191 D- and L-methionine transport protein (ABC superfamily, membrane) [Escherichia coli K12] | 199 | 1.2e-52
|
| paer | PA2351 [gene=PA2351] [prot=probable permease of ABC transporter] [comment=PA2351] | 213 | 1.8e-56
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| BPD_transp_1 | 1 | Binding-protein-dependent transport system inner membrane component | 33-215 | 63.0 | 2.7e-17
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_095855741.1 | MULTISPECIES: ABC transporter permease [unclassified Strepto...
| 966 | 2.5e-130 |
| WP_202498643.1 | ABC transporter permease [Streptomyces sp. SID5469]
| 966 | 2.9e-130 |
| WP_168527219.1 | ABC transporter permease [Streptomyces sp. RPA4-2] >gb
| 966 | 3.0e-130 |
| WP_099923738.1 | MULTISPECIES: ABC transporter permease [Streptomyces] >dbj
| 963 | 5.8e-130 |
| WP_060902348.1 | ABC transporter permease [Streptomyces sp. WAC00263] >lcl
| 962 | 1.0e-129 |
| WP_097283929.1 | MULTISPECIES: ABC transporter permease [unclassified Strepto...
| 961 | 1.5e-129 |
| WP_067365802.1 | ABC transporter permease [Streptomyces olivochromogenes] >gb...
| 960 | 2.0e-129 |
| WP_189187958.1 | ABC transporter permease [Streptomyces albiflavescens] >dbj
| 960 | 2.2e-129 |
| WP_143601086.1 | MULTISPECIES: ABC transporter permease [unclassified Strepto...
| 959 | 2.9e-129 |
| WP_168490073.1 | MULTISPECIES: ABC transporter permease [Streptomyces] >gb
| 958 | 3.8e-129 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4779 | Seems to have no N-terminal signal seq.
|