| ID | SAVERM_6822
| Type | CDS
|
| From | 8142864
| nt length | 1977
|
| To | 8144840
| aa length | 658
|
| Gene | thrS
| pI | 5.26
|
| Definition | putative threonyl-tRNA synthetase
| M.W (Da) | 74224
|
| Note | PF00587: tRNA synthetase class II core domain (G, H, P, S and T)
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | aminoacyl-tRNA-synthetase
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1531 thrS threonine-tRNA synthetase | 1251 | 0.0e+00
|
| sgr | SGR_6003 putative threonyl-tRNA synthetase | 1268 | 0.0e+00
|
| sam | SAM23877_1582 Threonine--tRNA ligase | 1263 | 0.0e+00
|
| scab | SCAB74751 putative threonyl-tRNA synthetase | 1310 | 0.0e+00
|
| sace | SACE_2004 threonyl-tRNA synthetase | 900 | 0.0e+00
|
| nfar | nfa37120 thrS threonyl-tRNA synthetase | 882 | 0.0e+00
|
| mtub | gi|15609751 threonyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv] | 875 | 0.0e+00
|
| cglu | gi|19552881 COG0441:Threonyl-tRNA synthetase [Corynebacterium glutamicum] | 845 | 0.0e+00
|
| bsub | BG10362 thrS, thrSV; threonyl-tRNA synthetase 1 [EC:6.1.1.3] | 514 | 7.7e-147
|
| ecoli | gi|16129675 threonyl-tRNA synthetase [Escherichia coli K12] | 478 | 4.1e-136
|
| paer | PA2744 [gene=thrS] [prot=threonyl-tRNA synthetase] [comment=PA2744] | 489 | 4.2e-139
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| tRNA-synt_2b | 1 | tRNA synthetase class II core domain (G, H, P, S and T) | 342-549 | 127.9 | 3.7e-37
|
| HGTP_anticodon | 1 | Anticodon binding domain | 561-649 | 70.9 | 7e-20
|
| tRNA_SAD | 1 | Threonyl and Alanyl tRNA synthetase second additional domain | 189-235 | 50.8 | 1.2e-13
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2676 | Seems to have no N-terminal signal seq.
|