| ID | SAVERM_6841
| Type | CDS
|
| From | 8167906
| nt length | 1230
|
| To | 8166677
| aa length | 409
|
| Gene |
| pI | 6.46
|
| Definition | hypothetical protein
| M.W (Da) | 46107
|
| Note | PF03993: Domain of Unknown Function (DUF349)
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1511 hypothetical protein | 583 | 0.0e+00
|
| sgr | SGR_6023 conserved hypothetical protein | 711 | 0.0e+00
|
| sam | SAM23877_1563 hypothetical protein | 711 | 0.0e+00
|
| scab | SCAB74971 hypothetical protein | 754 | 0.0e+00
|
| sace | SACE_1750 hypothetical protein | 343 | 5.0e-116
|
| nfar | nfa38330 hypothetical protein | 345 | 4.1e-96
|
| mtub | gi|15609868 CONSERVED HYPOTHETICAL ALANINE AND ARGININE RICH PROTEIN [Mycobacterium tuberculosis H37Rv] | 310 | 1.1e-85
|
| cglu | gi|19553151 COG0419:ATPase involved in DNA repair [Corynebacterium glutamicum] | 328 | 2.8e-91
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF349 | 3 | Domain of Unknown Function (DUF349) | 92-164, 168-241, 245-318 | 189.6 | 6.7e-57
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189188010.1 | DUF349 domain-containing protein [Streptomyces albiflavescen...
| 1732 | 0.0e+00 |
| WP_151468458.1 | DUF349 domain-containing protein [Streptomyces triticiradici...
| 1727 | 0.0e+00 |
| WP_095933049.1 | DUF349 domain-containing protein [Streptomyces sp. Tue6028] ...
| 1727 | 0.0e+00 |
| WP_103547807.1 | DUF349 domain-containing protein [Streptomyces populi] >gb
| 1724 | 0.0e+00 |
| WP_028801479.1 | DUF349 domain-containing protein [Streptomyces sp. 142MFCol3...
| 1721 | 0.0e+00 |
| WP_037621177.1 | DUF349 domain-containing protein [Streptomyces aureus]
| 1720 | 0.0e+00 |
| WP_099500228.1 | MULTISPECIES: DUF349 domain-containing protein [Streptomyces...
| 1718 | 0.0e+00 |
| WP_054233953.1 | MULTISPECIES: DUF349 domain-containing protein [unclassified...
| 1716 | 0.0e+00 |
| WP_075027562.1 | DUF349 domain-containing protein [Streptomyces mirabilis] >d...
| 1716 | 0.0e+00 |
| WP_217566338.1 | DUF349 domain-containing protein [Streptomyces sp. GbtcB7]
| 1714 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3196 | Seems to have no N-terminal signal seq.
|