| ID | SAVERM_6853
| Type | CDS
|
| From | 8180666
| nt length | 837
|
| To | 8181502
| aa length | 278
|
| Gene | aroE1
| pI | 4.72
|
| Definition | putative shikimate 5-dehydrogenase
| M.W (Da) | 29550
|
| Note | EC:1.1.1.25, PF08501: Shikimate dehydrogenase substrate binding domain
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1498 aroE shikimate | 374 | 7.0e-133
|
| sgr | SGR_6037 putative shikimate 5-dehydrogenase | 360 | 3.0e-127
|
| sam | SAM23877_1550 Shikimate 5-dehydrogenase I alpha | 405 | 1.0e-144
|
| scab | SCAB75091 putative shikimate 5-dehydrogenase | 439 | 3.0e-158
|
| sace | SACE_2055 shikimate 5-dehydrogenase | 187 | 5.0e-59
|
| nfar | nfa36410 shikimate 5-dehydrogenase | 200 | 1.3e-52
|
| mtub | gi|15609689 shikimate 5-dehydrogenase [Mycobacterium tuberculosis H37Rv] | 184 | 7.4e-48
|
| cglu | gi|19552841 COG0169:Shikimate 5-dehydrogenase [Corynebacterium glutamicum] | 152 | 1.3e-38
|
| paer | PA0025 [gene=aroE] [prot=shikimate dehydrogenase] [comment=PA0025] | 88 | 5.8e-19
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Shikimate_dh_N | 1 | Shikimate dehydrogenase substrate binding domain | 12-94 | 87.8 | 3.9e-25
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1065 | Seems to have no N-terminal signal seq.
|