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IDSAVERM_6861 TypeCDS
From8189332 nt length525
To8188808 aa length174
GenebldD pI7.75
Definitionputative DNA-binding protein M.W (Da)19068
NotePF01381: Helix-turn-helix AseI frg.G2
SignalP v.4.0Non-secretory protein | plot Categoryregulation


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1489 putative DNA binding protein3217.0e-115
sgrSGR_6045 putative transcriptional regulator3288.0e-118
samSAM23877_1541 DNA-binding protein3221.0e-115
scabSCAB75171 putative DNA-binding protein3281.0e-117
saceSACE_2077 putative transcriptional regulator (DNA-binding protein)2353.0e-81

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix21-7735.85.8e-09

HTH_311Helix-turn-helix domain16-7733.34.2e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
PBD00542.1 helix-turn-helix protein [Streptomyces sp. Ag82_O1-15] >emb 8052.6e-108
KPI07121.1 helix-turn-helix domain protein [Actinobacteria bacterium OK006] ... 8019.2e-108
ATL26290.1 Transcriptional Regulator BldD [Streptomyces formicae] 8001.1e-107
AYG84059.1 hypothetical protein DWB77_06268 [Streptomyces hundungensis] >dbj... 7982.7e-107
ROQ62891.1 helix-turn-helix protein [Streptomyces sp. 840.1] >gb 7965.0e-107
SCF60157.1 Helix-turn-helix [Streptomyces sp. Ncost-T10-10d] 7957.2e-107
SCD86907.1 Helix-turn-helix [Streptomyces sp. DvalAA-43] 7949.7e-107
EPD96635.1 hypothetical protein HMPREF1486_00810 [Streptomyces sp. HPH0547] 7932.1e-106
RPK71006.1 Helix-turn-helix protein [Streptomyces sp. ADI95-17] >dbj 7912.8e-106
GGW66341.1 transcriptional regulator [Streptomyces galilaeus] 7881.6e-105

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3504 Seems to have no N-terminal signal seq.