| ID | SAVERM_6863
| Type | CDS
|
| From | 8190239
| nt length | 978
|
| To | 8191216
| aa length | 325
|
| Gene | pyrB
| pI | 7.08
|
| Definition | putative aspartate carbamoyltransferase
| M.W (Da) | 35587
|
| Note | PF02729: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1487 aspartate carbamoyltransferase | 630 | 0.0e+00
|
| sgr | SGR_6047 putative aspartate carbamoyltransferase | 577 | 0.0e+00
|
| sam | SAM23877_1539 Aspartate carbamoyltransferase | 627 | 0.0e+00
|
| scab | SCAB75191 putative aspartate carbamoyltransferase | 627 | 0.0e+00
|
| sace | SACE_2079 aspartate carbamoyltransferase catalytic chain | 370 | 9.0e-130
|
| nfar | nfa36230 pyrB aspartate carbamoyltransferase | 366 | 1.7e-102
|
| mtub | gi|15608520 aspartate carbamoyltransferase catalytic subunit [Mycobacterium tuberculosis H37Rv] | 379 | 1.9e-106
|
| cglu | gi|19552824 COG0540:Aspartate carbamoyltransferase, catalytic chain [Corynebacterium glutamicum] | 352 | 1.8e-98
|
| bsub | BG10713 pyrB; aspartate carbamoyltransferase catalytic chain [EC:2.1.3.2] | 202 | 2.2e-53
|
| ecoli | gi|16132067 aspartate carbamoyltransferase catalytic subunit [Escherichia coli K12] | 133 | 1.4e-32
|
| paer | PA0402 [gene=pyrB] [prot=aspartate carbamoyltransferase] [comment=PA0402] | 263 | 2.1e-71
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| OTCace_N | 1 | Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain | 3-147 | 149.6 | 5.9e-44
|
| OTCace | 1 | Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain | 163-309 | 81.5 | 6.2e-23
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_164408620.1 | MULTISPECIES: aspartate carbamoyltransferase catalytic subun...
| 1657 | 0.0e+00 |
|
| 1656 | 0.0e+00 |
| WP_164315014.1 | aspartate carbamoyltransferase catalytic subunit [Streptomyc...
| 1655 | 0.0e+00 |
| WP_030607070.1 | aspartate carbamoyltransferase catalytic subunit [Streptomyc...
| 1655 | 0.0e+00 |
| WP_055526200.1 | MULTISPECIES: aspartate carbamoyltransferase catalytic subun...
| 1653 | 0.0e+00 |
| WP_033321792.1 | aspartate carbamoyltransferase catalytic subunit [Streptomyc...
| 1653 | 0.0e+00 |
| WP_189325765.1 | aspartate carbamoyltransferase catalytic subunit [Streptomyc...
| 1652 | 0.0e+00 |
| WP_019059741.1 | aspartate carbamoyltransferase catalytic subunit [Streptomyc...
| 1651 | 0.0e+00 |
| WP_093718944.1 | aspartate carbamoyltransferase catalytic subunit [Streptomyc...
| 1651 | 0.0e+00 |
| WP_189859090.1 | aspartate carbamoyltransferase catalytic subunit [Streptomyc...
| 1649 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2287 | Seems to have no N-terminal signal seq.
|