| ID | SAVERM_6866
| Type | CDS
|
| From | 8193122
| nt length | 1143
|
| To | 8194264
| aa length | 380
|
| Gene | carA
| pI | 6.65
|
| Definition | putative carbamoyl-phosphate synthase small subunit
| M.W (Da) | 40839
|
| Note | pyrAA, PF00988: Carbamoyl-phosphate synthase small chain, CPSase domain
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1484 carbamoyl-phosphate synthase pyrimidine-specific | 711 | 0.0e+00
|
| sgr | SGR_6050 putative carbamoyl-phosphate synthase small subunit | 702 | 0.0e+00
|
| sam | SAM23877_1536 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase | 693 | 0.0e+00
|
| scab | SCAB75221 putative carbamoyl-phosphate synthase small subunit | 734 | 0.0e+00
|
| sace | SACE_2082 carbamoyl-phosphate synthase small subunit | 519 | 0.0e+00
|
| nfar | nfa36200 carA carbamoyl-phosphate synthase small subunit | 496 | 1.7e-141
|
| mtub | gi|15608523 carbamoyl-phosphate synthase small subunit [Mycobacterium tuberculosis H37Rv] | 462 | 1.6e-131
|
| cglu | gi|19552822 COG0505:Carbamoylphosphate synthase small subunit [Corynebacterium glutamicum] | 436 | 1.1e-123
|
| bsub | BG10715 pyrAA; carbamoyl-phosphate synthase small chain [EC:6.3.5.5] | 293 | 8.7e-81
|
| ecoli | gi|16128026 carbamoyl-phosphate synthase small subunit [Escherichia coli K12] | 313 | 1.6e-86
|
| paer | PA4758 [gene=carA] [prot=carbamoyl-phosphate synthase small chain] [comment=PA4758] | 323 | 1.6e-89
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| CPSase_sm_chain | 1 | Carbamoyl-phosphate synthase small chain, CPSase domain | 13-139 | 175.0 | 4.8e-52
|
| GATase | 1 | Glutamine amidotransferase class-I | 193-373 | 133.0 | 9.6e-39
|
| Peptidase_C26 | 1 | Peptidase C26 | 247-356 | 33.7 | 2.8e-08
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189188039.1 | glutamine-hydrolyzing carbamoyl-phosphate synthase small sub...
| 1955 | 0.0e+00 |
| WP_099500253.1 | MULTISPECIES: glutamine-hydrolyzing carbamoyl-phosphate synt...
| 1947 | 0.0e+00 |
| WP_095933026.1 | glutamine-hydrolyzing carbamoyl-phosphate synthase small sub...
| 1931 | 0.0e+00 |
| WP_041128234.1 | glutamine-hydrolyzing carbamoyl-phosphate synthase small sub...
| 1927 | 0.0e+00 |
| WP_028803687.1 | glutamine-hydrolyzing carbamoyl-phosphate synthase small sub...
| 1924 | 0.0e+00 |
| WP_189301523.1 | glutamine-hydrolyzing carbamoyl-phosphate synthase small sub...
| 1923 | 0.0e+00 |
| WP_194082314.1 | glutamine-hydrolyzing carbamoyl-phosphate synthase small sub...
| 1920 | 0.0e+00 |
| WP_097261483.1 | glutamine-hydrolyzing carbamoyl-phosphate synthase small sub...
| 1920 | 0.0e+00 |
| WP_071364420.1 | glutamine-hydrolyzing carbamoyl-phosphate synthase small sub...
| 1918 | 0.0e+00 |
| WP_135330912.1 | glutamine-hydrolyzing carbamoyl-phosphate synthase small sub...
| 1917 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | | Seems to have an uncleavable N-term signal seq
|